chr3 : 181,698,205 – 181,698,506
301 bp 40 TFs 2 linked genes
This 301 bp open chromatin element is linked to ENSG00000276690 and ENSG00000239381 and is bound by 40 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000276690 1.1 kb Proximal Proximity
ENSG00000239381 2.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:181,693,205 – 181,703,506
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
ARID2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 192 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 301 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 115 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 257 bp overlap
BRD4 2 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 240 bp overlap
ChIP OCI-Ly1_JQ1 GSE53601.BRD4.OCI-Ly1_JQ1 223 bp overlap
CTCF 14 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 223 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 228 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 132 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 213 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 204 bp overlap
ChIP OCI-LY1 ENCFF455ESK 301 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 301 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 271 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 92 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 301 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 239 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 140 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 301 bp overlap
EP300 2 datasets
ChIP H1 ENCFF937OPV 155 bp overlap
ChIP WA01 ENCSR000AUQ.EP300.WA01 140 bp overlap
EZH2 3 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 162 bp overlap
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 238 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 301 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 261 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 175 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 134 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 212 bp overlap
IRF4 1 dataset
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 105 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 102 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 239 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 293 bp overlap
JUNB 2 datasets
ChIP GM12878 ENCFF667EJQ 194 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 90 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 171 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 83 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 226 bp overlap
PLAG1 1 dataset
Motif DE_12h DE_12h-PLAG1_MA0163.1 14 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 131 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 168 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 249 bp overlap
RNF2 1 dataset
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 301 bp overlap
Rhox11 1 dataset
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
SMARCA4 5 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 231 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 301 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 85 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 301 bp overlap
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 174 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SPI1 3 datasets
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 217 bp overlap
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 118 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 177 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap
TFAP2B 2 datasets
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
ChIP SK-N-SH ENCFF869XXQ 102 bp overlap
TFAP2C 3 datasets
Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 190 bp overlap
TFAP2E 1 dataset
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 100 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 288 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZKSCAN3 1 dataset
Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF263 1 dataset
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF341 4 datasets
ChIP HEK293 ENCFF944VMC 209 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 290 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 173 bp overlap
ChIP LBCL_EBV-transformed GSE107719.ZNF341.LBCL_EBV-transformed 290 bp overlap
ZNF766 1 dataset
ChIP HEK293T GSE78099.ZNF766.HEK293T 111 bp overlap