chr3 : 184,360,146 – 184,360,404
258 bp 52 TFs 2 linked genes
This 258 bp open chromatin element is linked to CLCN2 and POLR2H and is bound by 52 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CLCN2 1.2 kb Proximal Proximity
POLR2H 1.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:184,355,146 – 184,365,404
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
52 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 176 bp overlap
ARHGAP35 2 datasets
ChIP K-562 ENCSR571BUF.ARHGAP35.K-562 90 bp overlap
ChIP K562 ENCFF198TWI 163 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 209 bp overlap
ARID4B 1 dataset
ChIP K562 ENCFF791HBV 131 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 258 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 170 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 234 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 220 bp overlap
BRD4 1 dataset
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 123 bp overlap
CTCF 1 dataset
ChIP testis ENCFF128XQJ 57 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 177 bp overlap
DEK 1 dataset
ChIP HeLa-S3 ENCSR219MKK.DEK.HeLa-S3 132 bp overlap
DPF2 1 dataset
ChIP MCF-7 ENCSR234VCE.DPF2.MCF-7 254 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 205 bp overlap
ELF4 1 dataset
ChIP K562 ENCFF200OMJ 137 bp overlap
EZH2 1 dataset
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 149 bp overlap
HBP1 1 dataset
ChIP K562 ENCFF882TEV 193 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR711VWL.HDAC1.K-562 139 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 228 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR197ALX.HDGF.K-562 99 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 200 bp overlap
HIC1 2 datasets
ChIP HEK293 ENCFF252CFL 168 bp overlap
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 258 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 205 bp overlap
ChIP K562 ENCFF771OHZ 89 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 258 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 124 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 100 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 182 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 124 bp overlap
MAZ 1 dataset
ChIP K-562 ENCSR000EFX.MAZ.K-562 139 bp overlap
MIER1 1 dataset
ChIP K-562 ENCSR426MDV.MIER1.K-562 251 bp overlap
MTA2 3 datasets
ChIP K-562 ENCSR411UYA.MTA2.K-562 192 bp overlap
ChIP K562 ENCFF441KCP 198 bp overlap
ChIP K562 ENCFF441KCP 258 bp overlap
MYOD1 1 dataset
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 109 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 192 bp overlap
OTX1 1 dataset
ChIP K562 ENCFF829SLD 125 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 132 bp overlap
POLR2A 1 dataset
ChIP body of pancreas ENCFF675RCN 258 bp overlap
PRDM1 2 datasets
ChIP HEK293 ENCFF302TBP 218 bp overlap
ChIP HEK293 GSE76494.PRDM1.HEK293 85 bp overlap
RBM39 2 datasets
ChIP K-562 GSE120104.RBM39.K-562 125 bp overlap
ChIP K-562 ENCSR764OXF.RBM39.K-562 156 bp overlap
RFX1 1 dataset
ChIP MCF-7 ENCFF973QAD 233 bp overlap
RNF2 1 dataset
ChIP WA09 GSE105028.RNF2.WA09 258 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 79 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 258 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 176 bp overlap
SP2 2 datasets
ChIP HEK293 ENCFF181QXT 136 bp overlap
ChIP HEK293 ENCSR807LQP.SP2.HEK293 170 bp overlap
TP63 1 dataset
ChIP foreskin GSE126390.TP63.foreskin 247 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 246 bp overlap
ZFP36 2 datasets
ChIP K-562 ENCSR776CYN.ZFP36.K-562 148 bp overlap
ChIP K562 ENCFF255RZG 210 bp overlap
ZNF184 2 datasets
ChIP K-562 ENCSR546IHU.ZNF184.K-562 101 bp overlap
ChIP K562 ENCFF579ZRD 186 bp overlap
ZNF257 3 datasets
ChIP HEK293T GSE78099.ZNF257.HEK293T 258 bp overlap
ChIP K-562 ENCSR492FKD.ZNF257.K-562 181 bp overlap
ChIP K562 ENCFF849YZP 183 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 68 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 221 bp overlap
ZNF512 3 datasets
ChIP K-562 ENCSR591CCL.ZNF512.K-562 206 bp overlap
ChIP K562 ENCFF601EMZ 258 bp overlap
ChIP WTC11 ENCFF086TTM 159 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 184 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 70 bp overlap
ZNF823 1 dataset
ChIP HEK293T GSE78099.ZNF823.HEK293T 258 bp overlap