chr3 : 193,598,286 – 193,598,508
222 bp 52 TFs 3 linked genes
This 222 bp open chromatin element is linked to OPA1, ATP13A4, and ENSG00000293063 and is bound by 52 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
OPA1 5.1 kb Proximal Proximity
ATP13A4 5.2 kb Proximal Proximity
ENSG00000293063 5.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:193,593,286 – 193,603,508
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
52 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 182 bp overlap
ChIP K562 ENCFF938UXQ 222 bp overlap
BCL11A 2 datasets
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 68 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 81 bp overlap
BRD2 1 dataset
ChIP K-562_dilution-6-100 GSE140325.BRD2.K-562_dilution-6-100 135 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 129 bp overlap
ChIP K562 ENCFF673OEZ 222 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 109 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 222 bp overlap
EHMT2 2 datasets
ChIP K-562 ENCSR175EOM.EHMT2.K-562 156 bp overlap
ChIP K562 ENCFF053BWO 222 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 222 bp overlap
EP300 1 dataset
ChIP upper lobe of left lung ENCFF024QBJ 190 bp overlap
ESRRA 2 datasets
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 222 bp overlap
ChIP K562 ENCFF968PEP 203 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 222 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 222 bp overlap
FOSL1 2 datasets
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 178 bp overlap
ChIP K562 ENCFF455MKD 222 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 222 bp overlap
GATA1 8 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 67 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 129 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 222 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 126 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 144 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 168 bp overlap
ChIP K562 ENCFF094CMK 190 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 222 bp overlap
GATA2 5 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 222 bp overlap
ChIP K562 ENCFF544PCK 186 bp overlap
ChIP K562 ENCFF830LLA 222 bp overlap
ChIP K562 ENCFF830LLA 222 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 222 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 222 bp overlap
ChIP DE DE-GATA4-2 222 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 222 bp overlap
ChIP DE DE-GATA6-2 222 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 71 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 222 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 222 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 222 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 222 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 222 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 222 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 155 bp overlap
HDAC1 4 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 222 bp overlap
ChIP K-562 ENCSR711VWL.HDAC1.K-562 206 bp overlap
ChIP K562 ENCFF928TKZ 147 bp overlap
ChIP K562 ENCFF968WBH 190 bp overlap
HDAC2 6 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 222 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 163 bp overlap
ChIP K-562 GSE140325.HDAC2.K-562 172 bp overlap
ChIP K-562 ENCSR000BMG.HDAC2.K-562 132 bp overlap
ChIP K562 ENCFF744ALD 186 bp overlap
ChIP K562 ENCFF919OMP 222 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR563YDA.HDGF.K-562 181 bp overlap
ChIP K562 ENCFF195BET 222 bp overlap
JUND 2 datasets
ChIP K-562 ENCSR000EGN.JUND.K-562 112 bp overlap
ChIP K562 ENCFF830LVJ 187 bp overlap
KDM1A 9 datasets
ChIP K-562 ENCSR360HRA.KDM1A.K-562 222 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 222 bp overlap
ChIP K-562 ENCSR000ATX.KDM1A.K-562 198 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 157 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 149 bp overlap
ChIP K562 ENCFF128TYE 222 bp overlap
ChIP K562 ENCFF133OLU 222 bp overlap
ChIP K562 ENCFF934ZRG 222 bp overlap
ChIP K562 ENCFF934ZRG 222 bp overlap
MAX 2 datasets
ChIP K-562 ENCSR000EFV.MAX.K-562 116 bp overlap
ChIP P493-6 GSE36354.MAX.P493-6 115 bp overlap
MYC 3 datasets
ChIP K-562 ENCSR000EGJ.MYC.K-562 130 bp overlap
ChIP K562 ENCFF988ZRU 222 bp overlap
ChIP P493-6_Dpy30-shRNA GSE101853.MYC.P493-6_Dpy30-shRNA 86 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 222 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 222 bp overlap
NR2C1 4 datasets
ChIP K-562 ENCSR742IDN.NR2C1.K-562 168 bp overlap
ChIP K-562 ENCSR178DEG.NR2C1.K-562 193 bp overlap
ChIP K562 ENCFF239KMA 222 bp overlap
ChIP K562 ENCFF568JLK 90 bp overlap
NR2C2 3 datasets
ChIP K-562 ENCSR750LYM.NR2C2.K-562 222 bp overlap
ChIP K562 ENCFF750AXF 222 bp overlap
ChIP K562 ENCFF750AXF 222 bp overlap
NR2F1 2 datasets
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 222 bp overlap
ChIP K562 ENCFF221HJH 222 bp overlap
NR2F2 3 datasets
ChIP K-562 ENCSR000BRS.NR2F2.K-562 212 bp overlap
ChIP K562 ENCFF004YPK 163 bp overlap
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 105 bp overlap
NR2F6 3 datasets
ChIP K-562 ENCSR707QWA.NR2F6.K-562 222 bp overlap
ChIP K562 ENCFF239RSE 170 bp overlap
ChIP K562 ENCFF674RQA 222 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 151 bp overlap
ChIP K562 ENCFF236IUS 107 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 222 bp overlap
POLR2A 1 dataset
ChIP upper lobe of left lung ENCFF095BJW 222 bp overlap
RCOR1 2 datasets
ChIP K-562 ENCSR000EGC.RCOR1.K-562 133 bp overlap
ChIP K562 ENCFF216EEJ 137 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF061ATI 184 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 222 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 222 bp overlap
SMARCA4 1 dataset
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 190 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 198 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 160 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 222 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 160 bp overlap
SPI1 1 dataset
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 119 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 120 bp overlap
TEAD2 1 dataset
ChIP K562 ENCFF039ZWC 163 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 222 bp overlap
ZBTB11 1 dataset
ChIP K-562 ENCSR706BJO.ZBTB11.K-562 187 bp overlap
ZBTB7A 2 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 155 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 192 bp overlap
ZEB2 2 datasets
ChIP K-562 ENCSR004GKA.ZEB2.K-562 222 bp overlap
ChIP K562 ENCFF795CMH 222 bp overlap
ZNF766 1 dataset
ChIP K562 ENCFF348LDO 222 bp overlap
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