chr4 : 48,493,342 – 48,493,739
397 bp 17 TFs 2 linked genes
This 397 bp open chromatin element is linked to ZAR1 and SLC10A4 and is bound by 17 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ZAR1 3.1 kb Proximal Proximity
SLC10A4 10.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:48,488,342 – 48,498,739
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 241 bp overlap
CEBPA 5 datasets
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 170 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 89 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 187 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 187 bp overlap
ChIP THP-1_EtOH_8h GSE124032.CEBPA.THP-1_EtOH_8h 61 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 269 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 374 bp overlap
ChIP neural cell ENCFF442QNK 343 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 211 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 397 bp overlap
ChIP DE DE-FOXA2-2 397 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 397 bp overlap
ChIP DE DE-GATA4-2 397 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 397 bp overlap
ChIP DE DE-GATA6-2 397 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 157 bp overlap
MEF2D 1 dataset
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 191 bp overlap
MYC 1 dataset
ChIP CC-LP-1 GSE124430.MYC.CC-LP-1 239 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 179 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 327 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 190 bp overlap
REST 3 datasets
ChIP neural ENCSR000BTV.REST.neural 203 bp overlap
ChIP neural cell ENCFF882LXX 279 bp overlap
ChIP neural cell ENCFF882LXX 78 bp overlap
RUNX1 1 dataset
ChIP NB4 GSE81992.RUNX1.NB4 128 bp overlap
SUPT5H 1 dataset
ChIP MOLT-4_SNS GSE89384.SUPT5H.MOLT-4_SNS 217 bp overlap