Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

47 transcription factors

AR 1 dataset

ChIP DU145_FOXA1_ARQ6540X GSE47987.AR.DU145_FOXA1_ARQ6540X 360 bp overlap

BCL6B 3 datasets

Motif DE_36h DE_36h-BCL6B_MA0731.1 17 bp overlap

Motif DE_48h DE_48h-BCL6B_MA0731.1 17 bp overlap

Motif DE_60h DE_60h-BCL6B_MA0731.1 17 bp overlap

BRD4 2 datasets

ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 197 bp overlap

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 194 bp overlap

DMRTC2 1 dataset

Motif DE_48h DE_48h-DMRTC2_MA1479.2 11 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 1152 bp overlap

ERG 3 datasets

ChIP Jurkat GSE49091.ERG.Jurkat 127 bp overlap

ChIP Jurkat GSE49091.ERG.Jurkat 145 bp overlap

ChIP Jurkat GSE49091.ERG.Jurkat 158 bp overlap

ESR1 1 dataset

ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 130 bp overlap

EZH2 1 dataset

ChIP WSU-DLCL2 GSE45982.EZH2.WSU-DLCL2 121 bp overlap

Elf5 1 dataset

Motif DE_48h DE_48h-Elf5_MA0136.4 8 bp overlap

FEZF2 1 dataset

Motif DE_60h DE_60h-FEZF2_MA2341.1 8 bp overlap

FOXA1 2 datasets

Motif DE_36h DE_36h-FOXA1_MA0148.5 8 bp overlap

Motif DE_48h DE_48h-FOXA1_MA0148.5 8 bp overlap

FOXA2 3 datasets

ChIP DE DE-FOXA2-1 776 bp overlap

ChIP DE DE-FOXA2-1 373 bp overlap

ChIP DE DE-FOXA2-2 717 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 1432 bp overlap

ChIP DE DE-GATA4-2 1283 bp overlap

GATA6 14 datasets

ChIP AGS GSE51705.GATA6.AGS 191 bp overlap

ChIP AGS GSE51936.GATA6.AGS 79 bp overlap

ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 104 bp overlap

ChIP DE DE-GATA6-1 1212 bp overlap

ChIP DE DE-GATA6-2 1399 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 447 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 543 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 537 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 372 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 439 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 1342 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 1138 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 1075 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 1171 bp overlap

GLI3 2 datasets

Motif DE_48h DE_48h-GLI3_MA1491.3 15 bp overlap

Motif DE_60h DE_60h-GLI3_MA1491.3 15 bp overlap

GLIS1 2 datasets

Motif DE_48h DE_48h-GLIS1_MA0735.2 15 bp overlap

Motif DE_60h DE_60h-GLIS1_MA0735.2 15 bp overlap

GLIS3 2 datasets

Motif DE_48h DE_48h-GLIS3_MA0737.1 14 bp overlap

Motif DE_60h DE_60h-GLIS3_MA0737.1 14 bp overlap

Gli1 2 datasets

Motif DE_48h DE_48h-Gli1_MA1990.2 10 bp overlap

Motif DE_60h DE_60h-Gli1_MA1990.2 10 bp overlap

HNF1A 2 datasets

Motif DE_36h DE_36h-HNF1A_MA0046.3 13 bp overlap

Motif DE_48h DE_48h-HNF1A_MA0046.3 13 bp overlap

HNF1B 2 datasets

Motif DE_36h DE_36h-HNF1B_MA0153.2 13 bp overlap

Motif DE_48h DE_48h-HNF1B_MA0153.2 13 bp overlap

HOXB8 1 dataset

ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 307 bp overlap

ISL2 2 datasets

Motif DE_48h DE_48h-ISL2_MA0914.2 6 bp overlap

LIN54 2 datasets

Motif DE_36h DE_36h-LIN54_MA0619.2 7 bp overlap

Motif DE_48h DE_48h-LIN54_MA0619.2 7 bp overlap

Lhx3 1 dataset

Motif DE_48h DE_48h-Lhx3_MA0135.2 12 bp overlap

MED1 1 dataset

ChIP LNCaP_DHT GSE125245.MED1.LNCaP_DHT 164 bp overlap

Mecom 1 dataset

Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap

Nkx3-2 1 dataset

Motif DE_48h DE_48h-Nkx3-2_MA0122.4 10 bp overlap

PROP1 1 dataset

Motif DE_48h DE_48h-PROP1_MA0715.1 11 bp overlap

PSIP1 1 dataset

ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 154 bp overlap

Prdm5 1 dataset

Motif DE_60h DE_60h-Prdm5_MA1999.2 11 bp overlap

RELA 2 datasets

Motif DE_48h DE_48h-RELA_MA0107.1 10 bp overlap

ChIP K-562 ENCSR772EEN.RELA.K-562 323 bp overlap

SATB1 2 datasets

ChIP MCF-10A_N-term_CUT1 GSE123292.SATB1.MCF-10A_N-term_CUT1 318 bp overlap

ChIP MCF-10A_dHD GSE123292.SATB1.MCF-10A_dHD 502 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 479 bp overlap

SMAD2_3 3 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 639 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 337 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 1145 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 1078 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 1020 bp overlap

SOX8 1 dataset

ChIP RH4_DMSO-6H GSE116344.SOX8.RH4_DMSO-6H 258 bp overlap

SUPT5H 1 dataset

ChIP MOLT-4_NVP2 GSE89384.SUPT5H.MOLT-4_NVP2 112 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 426 bp overlap

TBP 2 datasets

Motif DE_36h DE_36h-TBP_MA0108.3 7 bp overlap

Motif DE_48h DE_48h-TBP_MA0108.3 7 bp overlap

TERF1 1 dataset

ChIP LCL GSE55053.TERF1.LCL 135 bp overlap

TFCP2 1 dataset

Motif DE_48h DE_48h-TFCP2_MA1968.2 9 bp overlap

ZNF135 1 dataset

Motif DE_60h DE_60h-ZNF135_MA1587.1 14 bp overlap

ZNF300 1 dataset

ChIP HEK293T GSE78099.ZNF300.HEK293T 296 bp overlap

ZNF318 1 dataset

ChIP K-562 ENCSR334HSW.ZNF318.K-562 253 bp overlap

ZNF524 1 dataset

Motif DE_60h DE_60h-ZNF524_MA2096.1 9 bp overlap

ZNF770 1 dataset

Motif DE_60h DE_60h-ZNF770_MA2099.1 8 bp overlap

Gene	Dist. to TSS	Distance	Link type
FRYL	107.1 kb	Distal	Multiome
OCIAD1	157.9 kb	Distal	Multiome
OCIAD2	233.6 kb	Distal	Multiome

Genome Browser