chr4 : 56,979,552 – 56,979,914
362 bp 75 TFs 2 linked genes
This 362 bp open chromatin element is linked to POLR2B and NOA1 and is bound by 75 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
POLR2B 1.8 kb Proximal Proximity
NOA1 1.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:56,974,552 – 56,984,914
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
75 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 362 bp overlap
ARNT 1 dataset
ChIP K-562 ENCSR613NUC.ARNT.K-562 327 bp overlap
ASH2L 1 dataset
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 358 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 104 bp overlap
BRD4 2 datasets
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 199 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 53 bp overlap
CCDC6 1 dataset
ChIP HepG2 ENCFF751JSA 64 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 157 bp overlap
CTCF 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 251 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 362 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 242 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 253 bp overlap
GATA1 2 datasets
ChIP erythroblast ENCFF867JAR 362 bp overlap
ChIP erythroblast ENCFF867JAR 307 bp overlap
GATAD1 1 dataset
ChIP HepG2 ENCFF044OVE 330 bp overlap
HDAC1 4 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 226 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.HDAC1.MCF-7_ARID1A-KO_clone14 132 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 362 bp overlap
ChIP NB4 GSE126720.HDAC1.NB4 135 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR075HTM.HDAC2.K-562 219 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 148 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 289 bp overlap
HNF4A 1 dataset
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 153 bp overlap
HNRNPLL 2 datasets
ChIP K-562 GSE120104.HNRNPLL.K-562 333 bp overlap
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 332 bp overlap
HOXA10 1 dataset
ChIP HepG2 ENCFF422LBU 68 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 250 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 111 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 121 bp overlap
KMT2A 13 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 262 bp overlap
ChIP HEK293T_C-term_C104 GSE90762.KMT2A.HEK293T_C-term_C104 362 bp overlap
ChIP HEK293T_C-term_C49 GSE90762.KMT2A.HEK293T_C-term_C49 303 bp overlap
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 327 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 362 bp overlap
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 244 bp overlap
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 164 bp overlap
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 224 bp overlap
ChIP MV4-11 GSE83671.KMT2A.MV4-11 292 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 362 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 362 bp overlap
ChIP SHI-1 GSE95511.KMT2A.SHI-1 149 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 183 bp overlap
MEN1 1 dataset
ChIP RS4-11_DMSO-D3-180110 GSE127507.MEN1.RS4-11_DMSO-D3-180110 115 bp overlap
MLLT1 3 datasets
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 319 bp overlap
ChIP K-562 ENCSR107GRP.MLLT1.K-562 359 bp overlap
ChIP K562 ENCFF074XRJ 201 bp overlap
MNT 1 dataset
ChIP K-562 ENCSR512NLO.MNT.K-562 188 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 127 bp overlap
MYC 1 dataset
ChIP LNCaP_MYC GSE73994.MYC.LNCaP_MYC 94 bp overlap
MYCN 2 datasets
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 232 bp overlap
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 248 bp overlap
MYPOP 1 dataset
ChIP HepG2 ENCFF176TQL 113 bp overlap
NBN 2 datasets
ChIP GM12878 ENCFF213ZNN 359 bp overlap
ChIP GM12878 ENCSR278SQL.NBN.GM12878 308 bp overlap
NELFA 2 datasets
ChIP HeLa_1h-Flavo-0-H2O2 GSE93931.NELFA.HeLa_1h-Flavo-0-H2O2 319 bp overlap
ChIP HeLa_Flavo-0-H2O2 GSE100742.NELFA.HeLa_Flavo-0-H2O2 352 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 219 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 141 bp overlap
NRF1 1 dataset
ChIP K562 ENCFF130SGK 344 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 138 bp overlap
ChIP K562 ENCFF286KMN 195 bp overlap
PBX3 2 datasets
ChIP GM12878 ENCFF285BQQ 158 bp overlap
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 110 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 144 bp overlap
PKNOX1 8 datasets
ChIP GM12878 ENCFF589FCY 294 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 344 bp overlap
ChIP HEK293T ENCFF174WDB 136 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 192 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 273 bp overlap
ChIP K562 ENCFF236IUS 205 bp overlap
ChIP MCF-7 ENCFF116OCS 168 bp overlap
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 315 bp overlap
POLR2A 2 datasets
ChIP IMR-90 ENCFF672YWV 362 bp overlap
ChIP K562 ENCFF262YXJ 362 bp overlap
RBBP5 1 dataset
ChIP K-562 ENCSR000AQI.RBBP5.K-562 145 bp overlap
RBFOX2 2 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 302 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 302 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 308 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 240 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 362 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 202 bp overlap
SIN3A 4 datasets
ChIP K-562 ENCSR920BLG.SIN3A.K-562 135 bp overlap
ChIP K562 ENCFF397YHR 224 bp overlap
ChIP SK-N-SH ENCFF931NFD 290 bp overlap
ChIP SK-N-SH ENCFF931NFD 174 bp overlap
SMAD4 1 dataset
ChIP HGrC1_C134W-TGF_parental GSE138496.SMAD4.HGrC1_C134W-TGF_parental 92 bp overlap
SMARCA4 5 datasets
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 191 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 215 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 140 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 184 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 227 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 160 bp overlap
ChIP MOLT-4_NVP2 GSE89384.SUPT5H.MOLT-4_NVP2 362 bp overlap
TAF1 2 datasets
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 187 bp overlap
ChIP K562 ENCFF491WAE 277 bp overlap
UBTF 1 dataset
ChIP HepG2 ENCFF424RNN 76 bp overlap
YEATS4 1 dataset
ChIP HepG2 ENCFF340OIC 61 bp overlap
YY1 3 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 271 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 95 bp overlap
ChIP K562 ENCFF660QRE 285 bp overlap
ZBTB6 1 dataset
Motif DE_36h DE_36h-ZBTB6_MA1581.2 9 bp overlap
ZFX 1 dataset
ChIP HEK293T_22Rv1 GSE145160.ZFX.HEK293T_22Rv1 162 bp overlap
ZNF135 1 dataset
Motif DE_36h DE_36h-ZNF135_MA1587.1 14 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 147 bp overlap
ZNF213 1 dataset
Motif DE_36h DE_36h-ZNF213_MA2121.1 12 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR695EQB.ZNF24.K-562 242 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 116 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 154 bp overlap
ZNF384 6 datasets
ChIP GM12878 ENCFF229VSP 210 bp overlap
ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 149 bp overlap
ChIP Hep-G2 ENCSR101FJU.ZNF384.Hep-G2 95 bp overlap
ChIP HepG2 ENCFF129PLC 171 bp overlap
ChIP K-562 ENCSR000EFP.ZNF384.K-562 87 bp overlap
ChIP K562 ENCFF365NXQ 169 bp overlap
ZNF441 1 dataset
ChIP HepG2 ENCFF738UDK 349 bp overlap
ZNF460 2 datasets
Motif DE_36h DE_36h-ZNF460_MA1596.1 16 bp overlap
ChIP HepG2 ENCFF007NNM 360 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 362 bp overlap