chr4 : 75,509,172 – 75,509,373
201 bp 16 TFs 2 linked genes
This 201 bp open chromatin element is linked to RCHY1 and THAP6 and is bound by 16 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RCHY1 4.9 kb Proximal Proximity
THAP6 5.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:75,504,172 – 75,514,373
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
ARNT 1 dataset
ChIP K-562 ENCSR155KHM.ARNT.K-562 201 bp overlap
EGR1 2 datasets
ChIP K-562 ENCSR000BNE.EGR1.K-562 127 bp overlap
ChIP K562 ENCFF006PJY 201 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 201 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 160 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 201 bp overlap
ChIP DE DE-GATA4-2 201 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 189 bp overlap
ChIP foregut GSE117136.GATA4.foregut 201 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 201 bp overlap
ChIP DE DE-GATA6-2 201 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 201 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 201 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 201 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 201 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 201 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 201 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 201 bp overlap
ChIP foregut GSE117136.GATA6.foregut 201 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 201 bp overlap
MNT 2 datasets
ChIP K562 ENCFF820IGH 201 bp overlap
ChIP K562 ENCFF820IGH 201 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 189 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 201 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 136 bp overlap
SMARCA4 4 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 179 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 195 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 200 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 167 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 151 bp overlap
SPI1 1 dataset
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 151 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 201 bp overlap