chr4 : 77,012,534 – 77,013,096
562 bp 56 TFs 3 linked genes
This 562 bp open chromatin element is linked to SEPTIN11, CCNI, and CCNG2 and is bound by 56 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SEPTIN11 63.0 kb Distal Multiome
CCNI 63.2 kb Distal Multiome
CCNG2 144.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:77,007,534 – 77,018,096
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
56 transcription factors
Source
Cell type
AR 4 datasets
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 260 bp overlap
ChIP prostate GSE56288.AR.prostate 360 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 312 bp overlap
ChIP prostate_P27 GSE130408.AR.prostate_P27 356 bp overlap
Ar 1 dataset
Motif DE_36h DE_36h-Ar_MA0007.4 16 bp overlap
BRD4 2 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 223 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 422 bp overlap
CTCF 3 datasets
ChIP heart left ventricle ENCFF987PUT 371 bp overlap
ChIP testis ENCFF409BGH 291 bp overlap
ChIP testis ENCSR981CID.CTCF.testis 191 bp overlap
DMRTA1 3 datasets
Motif DE_48h DE_48h-DMRTA1_MA1707.2 10 bp overlap
Motif DE_60h DE_60h-DMRTA1_MA1707.2 10 bp overlap
Motif DE_72h DE_72h-DMRTA1_MA1707.2 10 bp overlap
Dux 3 datasets
Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
Motif DE_72h DE_72h-Dux_MA0611.3 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 271 bp overlap
ERG 3 datasets
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 119 bp overlap
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 157 bp overlap
ChIP VCaP_SH2_DHT GSE79128.ERG.VCaP_SH2_DHT 186 bp overlap
ESR2 1 dataset
Motif DE_36h DE_36h-ESR2_MA0258.2 15 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 183 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 151 bp overlap
ETV1 1 dataset
ChIP GIST GSE22441.ETV1.GIST 136 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 303 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 499 bp overlap
ChIP DE DE-FOXA2-2 434 bp overlap
FOXC1 3 datasets
Motif DE_48h DE_48h-FOXC1_MA0032.2 11 bp overlap
Motif DE_60h DE_60h-FOXC1_MA0032.2 11 bp overlap
Motif DE_72h DE_72h-FOXC1_MA0032.2 11 bp overlap
FOXC2 3 datasets
Motif DE_48h DE_48h-FOXC2_MA0846.2 11 bp overlap
Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap
Motif DE_72h DE_72h-FOXC2_MA0846.2 11 bp overlap
FOXE1 3 datasets
Motif DE_48h DE_48h-FOXE1_MA1487.3 12 bp overlap
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
Motif DE_72h DE_72h-FOXE1_MA1487.3 12 bp overlap
FOXN3 3 datasets
Motif DE_48h DE_48h-FOXN3_MA1489.1 8 bp overlap
Motif DE_60h DE_60h-FOXN3_MA1489.1 8 bp overlap
Motif DE_72h DE_72h-FOXN3_MA1489.1 8 bp overlap
Foxl2 3 datasets
Motif DE_48h DE_48h-Foxl2_MA1607.2 10 bp overlap
Motif DE_60h DE_60h-Foxl2_MA1607.2 10 bp overlap
Motif DE_72h DE_72h-Foxl2_MA1607.2 10 bp overlap
Foxq1 3 datasets
Motif DE_48h DE_48h-Foxq1_MA0040.2 10 bp overlap
Motif DE_60h DE_60h-Foxq1_MA0040.2 10 bp overlap
Motif DE_72h DE_72h-Foxq1_MA0040.2 10 bp overlap
GATA1::TAL1 3 datasets
Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_72h DE_72h-GATA1TAL1_MA0140.3 17 bp overlap
GATA2 9 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 173 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 194 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 242 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 218 bp overlap
ChIP SK-N-SH ENCFF764OZD 321 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 147 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 135 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 435 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 289 bp overlap
GATA3 4 datasets
ChIP Jurkat GSE76181.GATA3.Jurkat 326 bp overlap
ChIP Jurkat GSE120063.GATA3.Jurkat 190 bp overlap
ChIP Jurkat GSE68976.GATA3.Jurkat 205 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 310 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 529 bp overlap
ChIP DE DE-GATA4-2 562 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 276 bp overlap
ChIP foregut GSE117136.GATA4.foregut 365 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 312 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 218 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 14 datasets
ChIP DE DE-GATA6-1 359 bp overlap
ChIP DE DE-GATA6-2 562 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 378 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 372 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 402 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 470 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 562 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 421 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 439 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 373 bp overlap
Gata3 4 datasets
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HAND2 2 datasets
Motif DE_48h DE_48h-HAND2_MA1638.2 6 bp overlap
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
KLF6 3 datasets
Motif DE_48h DE_48h-KLF6_MA1517.2 9 bp overlap
Motif DE_60h DE_60h-KLF6_MA1517.2 9 bp overlap
Motif DE_72h DE_72h-KLF6_MA1517.2 9 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 304 bp overlap
ChIP RH4 GSE83726.MED1.RH4 365 bp overlap
MYB 2 datasets
ChIP DU528 GSE94000.MYB.DU528 350 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 282 bp overlap
MYCN 1 dataset
ChIP SH-EP_MYCNER_minOHT GSE111905.MYCN.SH-EP_MYCNER_minOHT 131 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 205 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 438 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 250 bp overlap
NR2F2 1 dataset
ChIP liver ENCSR168SMX.NR2F2.liver 247 bp overlap
NR3C1 1 dataset
ChIP LNCaP_1F5_SIFOXA1 GSE30623.NR3C1.LNCaP_1F5_SIFOXA1 106 bp overlap
PGR 1 dataset
ChIP HUVEC-C_PR_PROGESTERON GSE43786.PGR.HUVEC-C_PR_PROGESTERON 233 bp overlap
POU2F3 1 dataset
Motif DE_60h DE_60h-POU2F3_MA0627.3 9 bp overlap
POU5F1 1 dataset
Motif DE_60h DE_60h-POU5F1_MA1115.2 7 bp overlap
PRDM9 1 dataset
Motif DE_72h DE_72h-PRDM9_MA1723.2 20 bp overlap
Pgr 1 dataset
Motif DE_36h DE_36h-Pgr_MA2323.1 17 bp overlap
RELA 1 dataset
ChIP KB_IL GSE52469.RELA.KB_IL 111 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE76181.RUNX1.Jurkat 178 bp overlap
RXRA 1 dataset
ChIP liver ENCFF077DAP 372 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 562 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 278 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 228 bp overlap
SREBF1 2 datasets
Motif DE_48h DE_48h-SREBF1_MA0829.3 10 bp overlap
Motif DE_60h DE_60h-SREBF1_MA0829.3 10 bp overlap
Stat5b 1 dataset
Motif DE_60h DE_60h-Stat5b_MA1625.2 9 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 339 bp overlap
TFAP4 2 datasets
Motif DE_48h DE_48h-TFAP4_MA1570.1 10 bp overlap
Motif DE_60h DE_60h-TFAP4_MA1570.1 10 bp overlap
TRPS1 4 datasets
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 293 bp overlap
ZNF574 1 dataset
Motif DE_72h DE_72h-ZNF574_MA1982.2 14 bp overlap
ZNF677 1 dataset
Motif DE_36h DE_36h-ZNF677_MA2101.1 12 bp overlap
ZNF684 1 dataset
Motif DE_72h DE_72h-ZNF684_MA1600.2 14 bp overlap