chr4 : 102,492,717 – 102,493,103
386 bp 33 TFs 2 linked genes
This 386 bp open chromatin element is linked to ENSG00000260651 and NFKB1 and is bound by 33 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000260651 8.2 kb Proximal Proximity
NFKB1 8.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:102,487,717 – 102,498,103
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
33 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 98 bp overlap
BRD2 5 datasets
ChIP MDA-MB-231_JQ1 GSE116879.BRD2.MDA-MB-231_JQ1 226 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_rDNA 226 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 308 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 308 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 223 bp overlap
BRD4 4 datasets
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 90 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 90 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 357 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 357 bp overlap
BRD9 2 datasets
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD9.MDA-MB-231_JQ1_MGSK2801 215 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 302 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 241 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 92 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 324 bp overlap
ChIP DE DE-GATA4-2 163 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 140 bp overlap
GATA6 4 datasets
ChIP AGS GSE51705.GATA6.AGS 132 bp overlap
ChIP DE DE-GATA6-1 63 bp overlap
ChIP DE DE-GATA6-2 158 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 116 bp overlap
GRHL2 1 dataset
ChIP HBE GSE46194.GRHL2.HBE 98 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 131 bp overlap
JUN 1 dataset
ChIP keratinocyte_CHD4-KD GSE139685.JUN.keratinocyte_CHD4-KD 90 bp overlap
JUND 1 dataset
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 129 bp overlap
KDM1A 1 dataset
ChIP K-562 GSE117944.KDM1A.K-562 77 bp overlap
MAX 1 dataset
ChIP P493-6_CMYC_1H GSE36354.MAX.P493-6_CMYC_1H 198 bp overlap
MYB 1 dataset
ChIP CD4_TH2 GSE72266.MYB.CD4_TH2 264 bp overlap
MYC 3 datasets
ChIP P493-6 GSE77061.MYC.P493-6 118 bp overlap
ChIP P493-6_CMYC_1H GSE36354.MYC.P493-6_CMYC_1H 159 bp overlap
ChIP U2OS_Doxy GSE77328.MYC.U2OS_Doxy 101 bp overlap
MYCN 1 dataset
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 173 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 197 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 151 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 145 bp overlap
RUNX1 1 dataset
ChIP MV4-11 GSE79899.RUNX1.MV4-11 138 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 155 bp overlap
SMAD3 1 dataset
ChIP HCC1954 GSE104760.SMAD3.HCC1954 261 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 189 bp overlap
ChIP K562 ENCFF690CFF 255 bp overlap
SPI1 31 datasets
ChIP BDMC_donorH GSE128834.SPI1.BDMC_donorH 90 bp overlap
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 145 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 297 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 108 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 108 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 187 bp overlap
ChIP DC_LPS GSE123347.SPI1.DC_LPS 105 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 154 bp overlap
ChIP GM12878 ENCFF134LCP 156 bp overlap
ChIP GM12891 ENCFF563IUT 148 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 122 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 200 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 123 bp overlap
ChIP K-562 GSE74999.SPI1.K-562 104 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 108 bp overlap
ChIP K-562_SAHA GSE74999.SPI1.K-562_SAHA 103 bp overlap
ChIP K562 ENCFF410ORC 69 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 125 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 174 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 174 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 105 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 151 bp overlap
ChIP dendrite GSE58864.SPI1.dendrite 121 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 121 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 134 bp overlap
ChIP primary-B-cell_donorA GSE128834.SPI1.primary-B-cell_donorA 188 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 113 bp overlap
ChIP primary-monocyte_4h_donorO GSE128834.SPI1.primary-monocyte_4h_donorO 125 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 78 bp overlap
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 113 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 116 bp overlap
TEAD1 2 datasets
ChIP K-562 ENCSR591ASD.TEAD1.K-562 90 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 386 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 168 bp overlap
YY1AP1 1 dataset
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 371 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 79 bp overlap
ZNF398 1 dataset
ChIP BG01V GSE133630.ZNF398.BG01V 135 bp overlap