chr4 : 102,869,921 – 102,870,207
286 bp 69 TFs 2 linked genes
This 286 bp open chromatin element is linked to CISD2 and UBE2D3 and is bound by 69 transcription factors.
Linked Genes
2 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CISD2 948 bp At TSS Proximity
UBE2D3 1.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:102,864,921 – 102,875,207
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
69 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP SEM_DMSO GSE90762.AFF1.SEM_DMSO 53 bp overlap
ARID1A 2 datasets
ChIP Hep-G2 GSE69566.ARID1A.Hep-G2 197 bp overlap
ChIP RMG-I GSE120058.ARID1A.RMG-I 114 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 108 bp overlap
ARNT 2 datasets
ChIP K-562 ENCSR613NUC.ARNT.K-562 94 bp overlap
ChIP K562 ENCFF291CXK 59 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 121 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 158 bp overlap
BRCA1 1 dataset
ChIP MCF-10A GSE40591.BRCA1.MCF-10A 82 bp overlap
BRD1 1 dataset
ChIP RKO GSE47190.BRD1.RKO 273 bp overlap
BRD4 6 datasets
ChIP K-562 ENCSR583ACG.BRD4.K-562 286 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 211 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 193 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 286 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 208 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 77 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 286 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 271 bp overlap
CUX1 2 datasets
ChIP K-562 ENCSR000EFO.CUX1.K-562 221 bp overlap
ChIP K562 ENCFF057AIX 286 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 109 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 176 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 137 bp overlap
ESR1 2 datasets
ChIP MCF-7_shFbxo_E2_4OHT GSE119702.ESR1.MCF-7_shFbxo_E2_4OHT 93 bp overlap
ChIP MCF-7_shFbxo_OHT GSE119702.ESR1.MCF-7_shFbxo_OHT 93 bp overlap
ESRRA 2 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 62 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 141 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 236 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 286 bp overlap
ChIP DE DE-FOXA2-2 286 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 266 bp overlap
GABPB1 1 dataset
ChIP K562 ENCFF885NMS 286 bp overlap
GATA3 1 dataset
ChIP MCF-7 GSE133072.GATA3.MCF-7 181 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 286 bp overlap
ChIP DE DE-GATA4-2 286 bp overlap
ChIP foregut GSE117136.GATA4.foregut 255 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 286 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 230 bp overlap
ChIP DE DE-GATA6-2 248 bp overlap
ChIP foregut GSE117136.GATA6.foregut 276 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 286 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 248 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 286 bp overlap
GATAD2B 1 dataset
ChIP K562 ENCFF696VMK 166 bp overlap
HDAC1 1 dataset
ChIP NB4 GSE126720.HDAC1.NB4 62 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 224 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 174 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 229 bp overlap
KLF6 2 datasets
ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 54 bp overlap
ChIP PDAC GSE64557.KLF6.PDAC 212 bp overlap
KMT2A 7 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 286 bp overlap
ChIP HEK293T_C-term_shCtrl GSE90762.KMT2A.HEK293T_C-term_shCtrl 256 bp overlap
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 223 bp overlap
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 140 bp overlap
ChIP MOLM-13 GSE114981.KMT2A.MOLM-13 105 bp overlap
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 230 bp overlap
ChIP MV4-11 GSE83671.KMT2A.MV4-11 286 bp overlap
MED1 3 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 284 bp overlap
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 111 bp overlap
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 191 bp overlap
MEN1 2 datasets
ChIP MOLM-13 GSE149183.MEN1.MOLM-13 286 bp overlap
ChIP PC-3 GSE132827.MEN1.PC-3 235 bp overlap
MGA 1 dataset
ChIP HepG2 ENCFF057YJE 83 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 225 bp overlap
ChIP K-562 ENCSR675LRO.MLLT1.K-562 286 bp overlap
MYBL2 1 dataset
ChIP HepG2 ENCFF176QIX 282 bp overlap
MYC 1 dataset
ChIP MIA-PaCa-2_CM GSE143804.MYC.MIA-PaCa-2_CM 54 bp overlap
NBN 2 datasets
ChIP GM12878 ENCSR278SQL.NBN.GM12878 169 bp overlap
ChIP K-562 ENCSR085QEV.NBN.K-562 208 bp overlap
NFRKB 1 dataset
ChIP K-562 ENCSR657EOF.NFRKB.K-562 189 bp overlap
NONO 1 dataset
ChIP K562 ENCFF268WFF 64 bp overlap
NR2C2 1 dataset
ChIP K562 ENCFF750AXF 199 bp overlap
NR2F2 1 dataset
ChIP HeLa GSE46237.NR2F2.HeLa 169 bp overlap
NRF1 1 dataset
ChIP HeLa-S3 GSE108856.NRF1.HeLa-S3 58 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 286 bp overlap
PHIP 4 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 286 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 286 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 286 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 226 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 140 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 149 bp overlap
RBFOX2 1 dataset
ChIP HepG2 ENCFF939HTZ 92 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 139 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 186 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 64 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 255 bp overlap
RUNX2 1 dataset
ChIP PER-117 GSE151819.RUNX2.PER-117 179 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 236 bp overlap
SMAD5 1 dataset
ChIP K-562 ENCSR000FCD.SMAD5.K-562 180 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 157 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 286 bp overlap
SMARCB1 2 datasets
ChIP Hep-G2 GSE69566.SMARCB1.Hep-G2 218 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 123 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 127 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 101 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 243 bp overlap
THRB 2 datasets
ChIP Hep-G2 ENCSR430JGJ.THRB.Hep-G2 59 bp overlap
ChIP HepG2 ENCFF476INC 103 bp overlap
TRPS1 2 datasets
ChIP MCF-7 GSE133072.TRPS1.MCF-7 286 bp overlap
ChIP T-47D GSE107013.TRPS1.T-47D 127 bp overlap
ZBTB8A 1 dataset
ChIP K562 ENCFF399HPQ 71 bp overlap
ZKSCAN2 1 dataset
ChIP HEK293T GSE78099.ZKSCAN2.HEK293T 255 bp overlap