chr1 : 77,983,355 – 77,983,855
500 bp 37 TFs 3 linked genes
This 500 bp open chromatin element is linked to GIPC2, DNAJB4, and FUBP1 and is bound by 37 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
GIPC2 3.8 kb Proximal Proximity
DNAJB4 4.1 kb Proximal Proximity
FUBP1 4.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:77,978,355 – 77,988,855
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 123 bp overlap
ATOH8 2 datasets
ChIP A-549 ENCSR161CZA.ATOH8.A-549 75 bp overlap
ChIP A549 ENCFF772HNB 167 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 382 bp overlap
EHF 2 datasets
ChIP A-549 ENCSR171TDM.EHF.A-549 76 bp overlap
ChIP A549 ENCFF352AOI 161 bp overlap
FOXA1 4 datasets
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 72 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 118 bp overlap
ChIP HepG2 ENCFF207NVJ 281 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 99 bp overlap
FOXA2 5 datasets
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 77 bp overlap
ChIP DE DE-FOXA2-1 359 bp overlap
ChIP DE DE-FOXA2-2 354 bp overlap
ChIP HepG2 ENCFF570ABM 244 bp overlap
ChIP HepG2 ENCFF894AYY 381 bp overlap
FOXA3 1 dataset
ChIP HepG2 ENCFF005KGL 361 bp overlap
FOXF2 1 dataset
ChIP A549 ENCFF148XDC 159 bp overlap
FOXS1 1 dataset
ChIP A549 ENCFF870VDS 196 bp overlap
HEYL 1 dataset
ChIP A549 ENCFF588UHP 168 bp overlap
HNF1A 2 datasets
ChIP HepG2 ENCFF352VYI 410 bp overlap
ChIP HepG2 ENCFF540TRC 485 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 204 bp overlap
HOXB13 2 datasets
ChIP A-549 ENCSR967ZMR.HOXB13.A-549 111 bp overlap
ChIP A549 ENCFF870NOA 157 bp overlap
HOXB5 2 datasets
ChIP A-549 ENCSR748HJZ.HOXB5.A-549 90 bp overlap
ChIP A549 ENCFF891VDO 161 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCFF159QSW 249 bp overlap
MAX 1 dataset
ChIP HepG2 ENCFF507HCX 312 bp overlap
MIXL1 1 dataset
ChIP HepG2 ENCFF817YFO 102 bp overlap
PBX1 2 datasets
ChIP A-549 ENCSR637RKG.PBX1.A-549 84 bp overlap
ChIP A549 ENCFF475JCE 165 bp overlap
POLR2A 3 datasets
ChIP body of pancreas ENCFF501FEC 273 bp overlap
ChIP body of pancreas ENCFF675RCN 332 bp overlap
ChIP body of pancreas ENCFF727UBE 111 bp overlap
PRDM1 1 dataset
ChIP A549 ENCFF012KDW 159 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCFF069PHD 66 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCFF283AJL 144 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 469 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 186 bp overlap
SIN3A 2 datasets
ChIP A549 ENCFF752ATT 475 bp overlap
ChIP A549 ENCFF752ATT 436 bp overlap
TP63 1 dataset
ChIP A549 ENCFF399JYQ 215 bp overlap
WT1 1 dataset
ChIP HEK293 ENCFF906HIR 218 bp overlap
YY1 1 dataset
ChIP Hep-G2 ENCSR000BNT.YY1.Hep-G2 58 bp overlap
ZNF189 1 dataset
ChIP HEK293 ENCFF638TIB 335 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 223 bp overlap
ZNF302 1 dataset
ChIP A549 ENCFF333REI 139 bp overlap
ZNF592 3 datasets
ChIP GM12878 ENCFF818ABS 161 bp overlap
ChIP GM12878 ENCSR173ZVL.ZNF592.GM12878 92 bp overlap
ChIP K562 ENCFF547OSS 165 bp overlap
ZNF624 2 datasets
ChIP A-549 ENCSR419VVI.ZNF624.A-549 87 bp overlap
ChIP A549 ENCFF802OXN 170 bp overlap
ZNF652 3 datasets
ChIP Hep-G2 ENCSR502GAX.ZNF652.Hep-G2 52 bp overlap
ChIP HepG2 ENCFF331VPZ 381 bp overlap
ChIP HepG2 ENCFF331VPZ 195 bp overlap
ZNF687 2 datasets
ChIP GM12878 ENCFF233SGE 247 bp overlap
ChIP GM12878 ENCSR859FDL.ZNF687.GM12878 75 bp overlap
ZSCAN20 1 dataset
ChIP A549 ENCFF611TGC 155 bp overlap