chr4 : 121,942,307 – 121,943,050
743 bp 10 TFs 2 linked genes
This 743 bp open chromatin element is linked to TRPC3 and ENSG00000289342 and is bound by 10 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TRPC3 7.8 kb Proximal Proximity
ENSG00000289342 7.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:121,937,307 – 121,948,050
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
10 transcription factors
Source
Cell type
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 251 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 323 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 260 bp overlap
FOXA1 2 datasets
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 148 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 314 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 711 bp overlap
ChIP DE DE-FOXA2-2 706 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 402 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 499 bp overlap
ChIP DE DE-GATA4-2 586 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 310 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 371 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 534 bp overlap
ChIP DE DE-GATA6-2 706 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 295 bp overlap
RNF2 2 datasets
ChIP A-549 ENCSR798EGJ.RNF2.A-549 162 bp overlap
ChIP K-562 ENCSR076YPO.RNF2.K-562 188 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 316 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 256 bp overlap