chr4 : 139,551,444 – 139,551,655
211 bp 47 TFs 2 linked genes
This 211 bp open chromatin element is linked to SETD7 and ENSG00000272717 and is bound by 47 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SETD7 4.6 kb Proximal Proximity
ENSG00000272717 5.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:139,546,444 – 139,556,655
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 102 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 104 bp overlap
BRD4 1 dataset
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 136 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 153 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 207 bp overlap
CTCF 1 dataset
ChIP dorsolateral prefrontal cortex ENCFF433UFM 147 bp overlap
EP300 1 dataset
ChIP tibial nerve ENCFF346AYA 53 bp overlap
ESR1 1 dataset
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 159 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 162 bp overlap
GATA1 5 datasets
ChIP K-562 GSE107726.GATA1.K-562 211 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 171 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 154 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 205 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 139 bp overlap
GATA2 2 datasets
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 167 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 211 bp overlap
GATA3 1 dataset
ChIP BE2C GSE65664.GATA3.BE2C 192 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 110 bp overlap
ChIP DE DE-GATA4-2 211 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 58 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 211 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 211 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 211 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 211 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 211 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 211 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 211 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 128 bp overlap
GFI1B 2 datasets
ChIP HEK293 ENCFF264FBS 211 bp overlap
ChIP HEK293 ENCSR445PDR.GFI1B.HEK293 151 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 211 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 97 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 211 bp overlap
HMBOX1 2 datasets
ChIP K562 ENCFF055GAZ 158 bp overlap
ChIP K562 ENCFF317JJX 115 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 156 bp overlap
ChIP K562 ENCFF348IBL 90 bp overlap
KMT2A 6 datasets
ChIP HEK293T_C-term_C104 GSE90762.KMT2A.HEK293T_C-term_C104 211 bp overlap
ChIP HEK293T_C-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_C-term_shCtrl_TASP1-KO 211 bp overlap
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 211 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 98 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 211 bp overlap
ChIP SHI-1 GSE95511.KMT2A.SHI-1 126 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 211 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 145 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 111 bp overlap
NEUROD1 4 datasets
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 211 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 211 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 211 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 211 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 148 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 211 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 211 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 211 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 211 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 211 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 211 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 211 bp overlap
ChIP HEK293 ENCFF283AJL 129 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 211 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 159 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 200 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 200 bp overlap
TRIM28 2 datasets
ChIP HEK293 ENCFF582MWI 69 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 92 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 83 bp overlap
ZBTB17 2 datasets
ChIP HEK293 ENCFF865LIO 124 bp overlap
ChIP HEK293 ENCFF865LIO 211 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 211 bp overlap
ZNF18 2 datasets
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 116 bp overlap
ChIP HEK293T GSE78099.ZNF18.HEK293T 64 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 73 bp overlap
ZNF337 1 dataset
ChIP HEK293T GSE78099.ZNF337.HEK293T 211 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 76 bp overlap