chr4 : 145,729,525 – 145,730,444
919 bp 46 TFs 3 linked genes
This 919 bp open chromatin element is linked to C4orf51, ZNF827, and SMAD1 and is bound by 46 transcription factors.
Linked Genes
3 genes
Distance
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
C4orf51 2.0 kb Proximal Proximity
ZNF827 208.9 kb Distal Multiome
SMAD1 248.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:145,724,525 – 145,735,444
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
46 transcription factors
Source
Cell type
ATF4 2 datasets
ChIP K-562 ENCSR145TSJ.ATF4.K-562 395 bp overlap
ChIP K562 ENCFF674KTF 383 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 164 bp overlap
CTCF 1 dataset
ChIP GSC23 GSE139416.CTCF.GSC23 275 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 272 bp overlap
E2F6 1 dataset
ChIP K-562 ENCSR000EWJ.E2F6.K-562 136 bp overlap
EOMES 5 datasets
Motif DE_36h DE_36h-EOMES_MA0800.2 9 bp overlap
Motif DE_48h DE_48h-EOMES_MA0800.2 9 bp overlap
Motif DE_60h DE_60h-EOMES_MA0800.2 9 bp overlap
Motif DE_72h DE_72h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 386 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 800 bp overlap
ChIP DE DE-FOXA2-2 633 bp overlap
GATA1 9 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 128 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 233 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 204 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 218 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 395 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 376 bp overlap
ChIP erythroblast ENCFF867JAR 605 bp overlap
ChIP erythroblast ENCFF867JAR 436 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 597 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 899 bp overlap
ChIP DE DE-GATA4-2 902 bp overlap
ChIP foregut GSE117136.GATA4.foregut 577 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 608 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 879 bp overlap
ChIP DE DE-GATA6-2 877 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 685 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 767 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 567 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 837 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 812 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 736 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 783 bp overlap
ChIP foregut GSE117136.GATA6.foregut 567 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 454 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 301 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 314 bp overlap
LDB1 2 datasets
ChIP HEP GSE52637.LDB1.HEP 123 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 134 bp overlap
MGA 4 datasets
Motif DE_36h DE_36h-MGA_MA0801.1 8 bp overlap
Motif DE_48h DE_48h-MGA_MA0801.1 8 bp overlap
Motif DE_60h DE_60h-MGA_MA0801.1 8 bp overlap
Motif DE_72h DE_72h-MGA_MA0801.1 8 bp overlap
MSANTD3 4 datasets
Motif DE_36h DE_36h-MSANTD3_MA1523.2 7 bp overlap
Motif DE_48h DE_48h-MSANTD3_MA1523.2 7 bp overlap
Motif DE_60h DE_60h-MSANTD3_MA1523.2 7 bp overlap
Motif DE_72h DE_72h-MSANTD3_MA1523.2 7 bp overlap
NCOR2 1 dataset
ChIP LS180_125 GSE39277.NCOR2.LS180_125 94 bp overlap
NFYB 4 datasets
Motif DE_36h DE_36h-NFYB_MA0502.3 9 bp overlap
Motif DE_48h DE_48h-NFYB_MA0502.3 9 bp overlap
Motif DE_60h DE_60h-NFYB_MA0502.3 9 bp overlap
Motif DE_72h DE_72h-NFYB_MA0502.3 9 bp overlap
PPARG 2 datasets
Motif DE_36h DE_36h-PPARG_MA0066.2 19 bp overlap
Motif DE_60h DE_60h-PPARG_MA0066.2 19 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 151 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 155 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 870 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 589 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 559 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 473 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 464 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 865 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 824 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 175 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 336 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 896 bp overlap
SUZ12 1 dataset
ChIP K-562 ENCSR000AUC.SUZ12.K-562 179 bp overlap
TAL1 7 datasets
ChIP K-562 GSE107726.TAL1.K-562 165 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 122 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 387 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 156 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 226 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 416 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 211 bp overlap
TBR1 4 datasets
Motif DE_36h DE_36h-TBR1_MA0802.2 9 bp overlap
Motif DE_48h DE_48h-TBR1_MA0802.2 9 bp overlap
Motif DE_60h DE_60h-TBR1_MA0802.2 9 bp overlap
Motif DE_72h DE_72h-TBR1_MA0802.2 9 bp overlap
TBX1 8 datasets
Motif DE_36h DE_36h-TBX1_MA0805.1 8 bp overlap
Motif DE_36h DE_36h-TBX1_MA0805.1 8 bp overlap
Motif DE_48h DE_48h-TBX1_MA0805.1 8 bp overlap
Motif DE_48h DE_48h-TBX1_MA0805.1 8 bp overlap
Motif DE_60h DE_60h-TBX1_MA0805.1 8 bp overlap
Motif DE_60h DE_60h-TBX1_MA0805.1 8 bp overlap
Motif DE_72h DE_72h-TBX1_MA0805.1 8 bp overlap
Motif DE_72h DE_72h-TBX1_MA0805.1 8 bp overlap
TBX15 4 datasets
Motif DE_36h DE_36h-TBX15_MA0803.1 8 bp overlap
Motif DE_48h DE_48h-TBX15_MA0803.1 8 bp overlap
Motif DE_60h DE_60h-TBX15_MA0803.1 8 bp overlap
Motif DE_72h DE_72h-TBX15_MA0803.1 8 bp overlap
TBX18 4 datasets
Motif DE_36h DE_36h-TBX18_MA1565.2 9 bp overlap
Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap
Motif DE_60h DE_60h-TBX18_MA1565.2 9 bp overlap
Motif DE_72h DE_72h-TBX18_MA1565.2 9 bp overlap
TBX2 4 datasets
Motif DE_36h DE_36h-TBX2_MA0688.2 9 bp overlap
Motif DE_48h DE_48h-TBX2_MA0688.2 9 bp overlap
Motif DE_60h DE_60h-TBX2_MA0688.2 9 bp overlap
Motif DE_72h DE_72h-TBX2_MA0688.2 9 bp overlap
TBX20 4 datasets
Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap
Motif DE_48h DE_48h-TBX20_MA0689.1 11 bp overlap
Motif DE_60h DE_60h-TBX20_MA0689.1 11 bp overlap
Motif DE_72h DE_72h-TBX20_MA0689.1 11 bp overlap
TBX21 8 datasets
Motif DE_36h DE_36h-TBX21_MA0690.3 10 bp overlap
Motif DE_36h DE_36h-TBX21_MA0690.3 10 bp overlap
Motif DE_48h DE_48h-TBX21_MA0690.3 10 bp overlap
Motif DE_48h DE_48h-TBX21_MA0690.3 10 bp overlap
Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap
Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap
Motif DE_72h DE_72h-TBX21_MA0690.3 10 bp overlap
Motif DE_72h DE_72h-TBX21_MA0690.3 10 bp overlap
TBX3 4 datasets
Motif DE_36h DE_36h-TBX3_MA1566.3 9 bp overlap
Motif DE_48h DE_48h-TBX3_MA1566.3 9 bp overlap
Motif DE_60h DE_60h-TBX3_MA1566.3 9 bp overlap
Motif DE_72h DE_72h-TBX3_MA1566.3 9 bp overlap
TBX4 4 datasets
Motif DE_36h DE_36h-TBX4_MA0806.1 8 bp overlap
Motif DE_48h DE_48h-TBX4_MA0806.1 8 bp overlap
Motif DE_60h DE_60h-TBX4_MA0806.1 8 bp overlap
Motif DE_72h DE_72h-TBX4_MA0806.1 8 bp overlap
TBX5 4 datasets
Motif DE_36h DE_36h-TBX5_MA0807.1 8 bp overlap
Motif DE_48h DE_48h-TBX5_MA0807.1 8 bp overlap
Motif DE_60h DE_60h-TBX5_MA0807.1 8 bp overlap
Motif DE_72h DE_72h-TBX5_MA0807.1 8 bp overlap
Tbx6 4 datasets
Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap
Motif DE_48h DE_48h-Tbx6_MA1567.3 9 bp overlap
Motif DE_60h DE_60h-Tbx6_MA1567.3 9 bp overlap
Motif DE_72h DE_72h-Tbx6_MA1567.3 9 bp overlap
ZFP28 1 dataset
ChIP HEK293 GSE76494.ZFP28.HEK293 213 bp overlap
ZNF418 2 datasets
Motif DE_36h DE_36h-ZNF418_MA1980.1 15 bp overlap
Motif DE_60h DE_60h-ZNF418_MA1980.1 15 bp overlap
ZSCAN16 3 datasets
Motif DE_36h DE_36h-ZSCAN16_MA2100.1 18 bp overlap
Motif DE_48h DE_48h-ZSCAN16_MA2100.1 18 bp overlap
Motif DE_60h DE_60h-ZSCAN16_MA2100.1 18 bp overlap
ZSCAN4 4 datasets
Motif DE_36h DE_36h-ZSCAN4_MA1155.1 15 bp overlap
Motif DE_48h DE_48h-ZSCAN4_MA1155.1 15 bp overlap
Motif DE_60h DE_60h-ZSCAN4_MA1155.1 15 bp overlap
Motif DE_72h DE_72h-ZSCAN4_MA1155.1 15 bp overlap
Zic2 2 datasets
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap