chr4 : 168,831,310 – 168,831,437
127 bp 41 TFs 2 linked genes
This 127 bp open chromatin element is linked to PALLD and ENSG00000249609 and is bound by 41 transcription factors.
Linked Genes
2 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PALLD 605 bp At TSS Proximity
ENSG00000249609 1.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:168,826,310 – 168,836,437
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 64 bp overlap
BRD4 1 dataset
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 127 bp overlap
CDK8 4 datasets
ChIP leiomyoma_PT1063 GSE128230.CDK8.leiomyoma_PT1063 88 bp overlap
ChIP leiomyoma_PT848 GSE128230.CDK8.leiomyoma_PT848 98 bp overlap
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 127 bp overlap
ChIP leiomyoma_PT916 GSE128230.CDK8.leiomyoma_PT916 65 bp overlap
EGR1 1 dataset
ChIP macrophage_D3 GSE136216.EGR1.macrophage_D3 127 bp overlap
EP300 1 dataset
ChIP AML GSE131939.EP300.AML 110 bp overlap
ESR1 2 datasets
ChIP MCF-7_Fulv GSE115607.ESR1.MCF-7_Fulv 127 bp overlap
ChIP MCF-7_G6274 GSE117941.ESR1.MCF-7_G6274 59 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 127 bp overlap
FOS 1 dataset
ChIP leiomyoma_PT1063 GSE128230.FOS.leiomyoma_PT1063 64 bp overlap
HNF4A 2 datasets
ChIP HCT-116_TCF4 GSE62890.HNF4A.HCT-116_TCF4 127 bp overlap
ChIP HCT-116_TCF4_DOX GSE62890.HNF4A.HCT-116_TCF4_DOX 127 bp overlap
HOXB13 2 datasets
ChIP G-401 GSE65381.HOXB13.G-401 127 bp overlap
ChIP prostate_P23 GSE130408.HOXB13.prostate_P23 61 bp overlap
JMJD1C 1 dataset
ChIP HL-60 GSE63484.JMJD1C.HL-60 127 bp overlap
JUN 1 dataset
ChIP leiomyoma_PT886 GSE128230.JUN.leiomyoma_PT886 64 bp overlap
JUND 2 datasets
ChIP HCT-116 ENCSR000BSA.JUND.HCT-116 83 bp overlap
ChIP HCT116 ENCFF748ZQX 127 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 50 bp overlap
MED12 2 datasets
ChIP leiomyoma_PT1063 GSE128230.MED12.leiomyoma_PT1063 88 bp overlap
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 82 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 72 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 97 bp overlap
NANOG 1 dataset
ChIP hESC GSE18292.NANOG.hESC 51 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 127 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 127 bp overlap
PHIP 3 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 127 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 127 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 127 bp overlap
POLR2A 1 dataset
ChIP sigmoid colon ENCFF754JQR 102 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 127 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 83 bp overlap
RAD21 1 dataset
ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 120 bp overlap
RNF2 3 datasets
ChIP K-562 ENCSR138FUZ.RNF2.K-562 76 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 127 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 127 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE76181.RUNX1.Jurkat 127 bp overlap
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 92 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 94 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 56 bp overlap
SPI1 15 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 91 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 80 bp overlap
ChIP GM12891 ENCFF563IUT 59 bp overlap
ChIP HL-60 ENCFF645GBT 100 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 73 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 95 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 57 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 113 bp overlap
ChIP dendrite GSE58864.SPI1.dendrite 63 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 97 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 91 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 127 bp overlap
ChIP primary-monocyte_4h_donorO GSE128834.SPI1.primary-monocyte_4h_donorO 64 bp overlap
ChIP primary-monocyte_LPS-4h_donorO GSE128834.SPI1.primary-monocyte_LPS-4h_donorO 112 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 76 bp overlap
SPIB 1 dataset
ChIP OCI-Ly3 GSE56857.SPIB.OCI-Ly3 63 bp overlap
TCF7L2 7 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 127 bp overlap
ChIP HCT-116_C16 GSE127960.TCF7L2.HCT-116_C16 127 bp overlap
ChIP HCT-116_C18 GSE127960.TCF7L2.HCT-116_C18 127 bp overlap
ChIP HCT-116_WT GSE127960.TCF7L2.HCT-116_WT 127 bp overlap
ChIP HCT-116_sc2 GSE127960.TCF7L2.HCT-116_sc2 127 bp overlap
ChIP HCT116 ENCFF038POZ 127 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 127 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 93 bp overlap
ZBTB48 1 dataset
ChIP HEK293 ENCFF809BPK 52 bp overlap
ZNF24 3 datasets
ChIP GM12878 ENCSR072PWP.ZNF24.GM12878 94 bp overlap
ChIP K-562 ENCSR099NCH.ZNF24.K-562 81 bp overlap
ChIP K-562 ENCSR695EQB.ZNF24.K-562 78 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 101 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 93 bp overlap
ZNF664 2 datasets
ChIP HEK293 ENCFF343XSW 125 bp overlap
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 127 bp overlap