chr4 : 174,284,609 – 174,284,742
133 bp 90 TFs 2 linked genes
This 133 bp open chromatin element is linked to CEP44 and FBXO8 and is bound by 90 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CEP44 880 bp At TSS Proximity
FBXO8 963 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:174,279,609 – 174,289,742
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
90 transcription factors
Source
Cell type
AFF1 2 datasets
ChIP K562 ENCFF583EEH 133 bp overlap
ChIP K562 ENCFF583EEH 76 bp overlap
ARID2 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 56 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 133 bp overlap
ChIP Hep-G2 GSE69566.ARID2.Hep-G2 50 bp overlap
ARID3A 1 dataset
ChIP HepG2 ENCFF341DES 133 bp overlap
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
BRD2 7 datasets
ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 94 bp overlap
ChIP MDA-MB-231_BAZ2AsiRNA_JQ1 GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA_JQ1 72 bp overlap
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 133 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD2.MDA-MB-231_DMSO 61 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD2.MDA-MB-231_DMSO_rDNA 61 bp overlap
ChIP SUM149PT_DMSO GSE131097.BRD2.SUM149PT_DMSO 101 bp overlap
ChIP SUM149PT_JQ1 GSE131097.BRD2.SUM149PT_JQ1 133 bp overlap
BRD3 1 dataset
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 65 bp overlap
BRD4 14 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 133 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 133 bp overlap
ChIP HeLa GSE151038.BRD4.HeLa 96 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 115 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 83 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 83 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 50 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 74 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 74 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 133 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 96 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 118 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 95 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 133 bp overlap
BRD9 2 datasets
ChIP K-562 ENCSR177XCS.BRD9.K-562 133 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 133 bp overlap
CHD1 1 dataset
ChIP K-562 ENCSR000AQD.CHD1.K-562 133 bp overlap
CREB1 1 dataset
ChIP KG-1_XX65023 GSE74928.CREB1.KG-1_XX65023 133 bp overlap
CSDE1 1 dataset
ChIP K562 ENCFF209YQQ 133 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 133 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 126 bp overlap
E2F6 1 dataset
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 133 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 133 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 133 bp overlap
ELF4 1 dataset
ChIP HepG2 ENCFF752OAT 133 bp overlap
EOMES 1 dataset
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
ESRRA 1 dataset
ChIP BT-474 GSE81651.ESRRA.BT-474 133 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 80 bp overlap
FOXA1 3 datasets
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 61 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 133 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 104 bp overlap
FOXK2 1 dataset
ChIP K-562 ENCSR302AWT.FOXK2.K-562 133 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 58 bp overlap
HMBOX1 1 dataset
ChIP K562 ENCFF317JJX 133 bp overlap
HSF1 1 dataset
Motif DE_12h DE_12h-HSF1_MA0486.2 13 bp overlap
HSF2 1 dataset
Motif DE_12h DE_12h-HSF2_MA0770.1 13 bp overlap
HSF4 1 dataset
Motif DE_12h DE_12h-HSF4_MA0771.1 13 bp overlap
Hand1 1 dataset
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
Hmga1 1 dataset
Motif DE_12h DE_12h-Hmga1_MA2124.1 8 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 133 bp overlap
ChIP K562 ENCFF348IBL 77 bp overlap
ChIP K562 ENCFF771OHZ 101 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 61 bp overlap
JUND 1 dataset
ChIP K562 ENCFF336RCR 101 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF15 1 dataset
Motif DE_12h DE_12h-KLF15_MA1513.2 8 bp overlap
KMT2A 4 datasets
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 133 bp overlap
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 133 bp overlap
ChIP MV4-11 GSE83671.KMT2A.MV4-11 121 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 113 bp overlap
MCRS1 1 dataset
ChIP Huh-7 GSE97411.MCRS1.Huh-7 133 bp overlap
MEN1 2 datasets
ChIP MCF-7_E2 GSE85317.MEN1.MCF-7_E2 133 bp overlap
ChIP RS4-11_DMSO-D3-180110 GSE127507.MEN1.RS4-11_DMSO-D3-180110 133 bp overlap
MLLT1 3 datasets
ChIP GM12878 ENCFF995GXC 105 bp overlap
ChIP K-562 ENCSR675LRO.MLLT1.K-562 133 bp overlap
ChIP K562 ENCFF871DSA 133 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 133 bp overlap
NELFCD 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NELFCD.DLD-1_NELFCD-AID 105 bp overlap
NKRF 1 dataset
ChIP K562 ENCFF815TQL 133 bp overlap
NR1I3 1 dataset
Motif DE_12h DE_12h-NR1I3_MA1534.2 8 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 133 bp overlap
Nr2F6 1 dataset
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 133 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 133 bp overlap
PHOX2B 1 dataset
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
POLR2A 1 dataset
ChIP K562 ENCFF137JSF 66 bp overlap
POLR2H 1 dataset
ChIP K562 ENCFF377NHG 101 bp overlap
PRDM1 3 datasets
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
ChIP HEK293 ENCFF302TBP 133 bp overlap
ChIP HEK293 GSE76494.PRDM1.HEK293 124 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 107 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Rarg 1 dataset
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
SFPQ 1 dataset
ChIP LTAD_DHT-1nM GSE94577.SFPQ.LTAD_DHT-1nM 133 bp overlap
SMAD3 1 dataset
ChIP breast-cancer_triple-negative GSE130364.SMAD3.breast-cancer_triple-negative 73 bp overlap
SMARCA4 6 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 110 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 52 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 73 bp overlap
ChIP MCF-7 GSE140185.SMARCA4.MCF-7 133 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 133 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 125 bp overlap
SNAI2 1 dataset
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 108 bp overlap
SP1 1 dataset
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
SP2 1 dataset
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 66 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 84 bp overlap
TBR1 1 dataset
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
THRAP3 1 dataset
ChIP K562 ENCFF445ZEJ 133 bp overlap
TRIM25 2 datasets
ChIP K562 ENCFF376TLP 133 bp overlap
ChIP K562 ENCFF786UTW 133 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
Vdr 1 dataset
Motif DE_12h DE_12h-Vdr_MA0693.4 7 bp overlap
ZBED4 1 dataset
Motif DE_12h DE_12h-ZBED4_MA2328.1 10 bp overlap
ZC3H8 1 dataset
ChIP K562 ENCFF495URH 133 bp overlap
ZNF263 1 dataset
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF320 1 dataset
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
ZNF384 1 dataset
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
ZNF652 1 dataset
Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap