chr4 : 185,480,181 – 185,480,728
547 bp 39 TFs 2 linked genes
This 547 bp open chromatin element is linked to ENSG00000249679 and CCDC110 and is bound by 39 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000249679 8.7 kb Proximal Proximity
CCDC110 9.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:185,475,181 – 185,485,728
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
AHR 1 dataset
ChIP GM01310_3MC GSE116632.AHR.GM01310_3MC 145 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 504 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 259 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 277 bp overlap
BRD2 1 dataset
ChIP MM1-S GSE43743.BRD2.MM1-S 192 bp overlap
BRD4 5 datasets
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 259 bp overlap
ChIP MM1-S GSE45984.BRD4.MM1-S 392 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 373 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 176 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 365 bp overlap
CBFB 1 dataset
ChIP GM12878 ENCFF056JUS 306 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 340 bp overlap
CEBPB 1 dataset
ChIP H1 ENCFF871PTR 237 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 159 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 136 bp overlap
ChIP BLaER1 ENCFF274GAT 289 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 354 bp overlap
EP300 2 datasets
ChIP GM12878 ENCSR000BHB.EP300.GM12878 117 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 250 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 255 bp overlap
EZH2 1 dataset
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 166 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 504 bp overlap
ChIP DE DE-FOXA2-2 454 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 446 bp overlap
ChIP DE DE-GATA4-2 403 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 442 bp overlap
ChIP DE DE-GATA6-2 391 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 263 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 367 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 368 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 248 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 384 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 328 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 286 bp overlap
MED1 2 datasets
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 292 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 247 bp overlap
MYC 1 dataset
ChIP MM1-S_DMSO GSE36354.MYC.MM1-S_DMSO 257 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 168 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 390 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 320 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 184 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 443 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 343 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 321 bp overlap
ChIP hESC GSE20650.NANOG.hESC 218 bp overlap
ChIP hESC GSE18292.NANOG.hESC 181 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 387 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 320 bp overlap
PRDM10 2 datasets
ChIP K-562 ENCSR120MPG.PRDM10.K-562 289 bp overlap
ChIP K562 ENCFF740YLK 237 bp overlap
RBPJ 1 dataset
ChIP MUTUL GSE75503.RBPJ.MUTUL 161 bp overlap
REL 1 dataset
ChIP Ramos GSE139810.REL.Ramos 337 bp overlap
RNF2 1 dataset
ChIP WA09 GSE105028.RNF2.WA09 285 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 412 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 301 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 339 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 284 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 377 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 227 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 544 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 208 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 217 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 144 bp overlap
STAT3 1 dataset
ChIP OCI-Ly7 GSE50723.STAT3.OCI-Ly7 285 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 257 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 148 bp overlap
TCF3 2 datasets
ChIP NPC GSE154479.TCF3.NPC 391 bp overlap
ChIP Ramos GSE139810.TCF3.Ramos 63 bp overlap
ZNF496 1 dataset
ChIP HEK293T GSE78099.ZNF496.HEK293T 194 bp overlap
ZNF766 1 dataset
ChIP HEK293T GSE78099.ZNF766.HEK293T 111 bp overlap