chr5 : 1,596,630 – 1,596,859
229 bp 15 TFs 3 linked genes
This 229 bp open chromatin element is linked to LINC03067, ENSG00000291055, and SDHAP3 and is bound by 15 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LINC03067 2.0 kb Proximal Proximity
ENSG00000291055 2.0 kb Proximal Proximity
SDHAP3 3.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:1,591,630 – 1,601,859
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
EHF 1 dataset
ChIP A549 ENCFF352AOI 92 bp overlap
EP300 2 datasets
ChIP upper lobe of left lung ENCFF024QBJ 181 bp overlap
ChIP upper lobe of left lung ENCFF720RAR 181 bp overlap
FOXA1 1 dataset
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 133 bp overlap
FOXA2 3 datasets
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 119 bp overlap
ChIP DE DE-FOXA2-1 229 bp overlap
ChIP DE DE-FOXA2-2 229 bp overlap
FOXF2 1 dataset
ChIP A549 ENCFF148XDC 103 bp overlap
FOXS1 1 dataset
ChIP A549 ENCFF870VDS 81 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 155 bp overlap
HOXB13 1 dataset
ChIP A549 ENCFF870NOA 149 bp overlap
HOXB5 1 dataset
ChIP A549 ENCFF891VDO 104 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCFF159QSW 190 bp overlap
NR5A2 1 dataset
ChIP A549 ENCFF834RVE 180 bp overlap
PBX1 1 dataset
ChIP A549 ENCFF475JCE 114 bp overlap
POLR2A 1 dataset
ChIP upper lobe of left lung ENCFF640VPA 229 bp overlap
ZNF302 1 dataset
ChIP A549 ENCFF333REI 82 bp overlap
ZNF624 1 dataset
ChIP A549 ENCFF802OXN 98 bp overlap