chr5 : 64,770,235 – 64,770,535
300 bp 19 TFs 2 linked genes
This 300 bp open chromatin element is linked to CWC27 and SREK1IP1 and is bound by 19 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CWC27 1.3 kb Proximal Proximity
SREK1IP1 1.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:64,765,235 – 64,775,535
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP K-562 ENCSR028UIU.ATF3.K-562 73 bp overlap
ATF4 2 datasets
ChIP K-562 ENCSR145TSJ.ATF4.K-562 74 bp overlap
ChIP K562 ENCFF674KTF 73 bp overlap
ATF7 1 dataset
ChIP MCF-7 ENCFF578WKB 54 bp overlap
CEBPG 1 dataset
ChIP K562 ENCFF783ADE 150 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF798NMV 54 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 182 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 300 bp overlap
ChIP DE DE-FOXA2-2 300 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 300 bp overlap
ChIP DE DE-GATA4-2 300 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 300 bp overlap
ChIP DE DE-GATA6-2 300 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 300 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 300 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 297 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 300 bp overlap
MAFG 1 dataset
ChIP K-562 ENCSR818DQV.MAFG.K-562 74 bp overlap
RBFOX2 6 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 300 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 300 bp overlap
ChIP K562 ENCFF196WTG 236 bp overlap
ChIP K562 ENCFF196WTG 300 bp overlap
ChIP K562 ENCFF967GRF 236 bp overlap
ChIP K562 ENCFF967GRF 300 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 173 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 300 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 223 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 300 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 300 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 149 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 300 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 99 bp overlap