chr5 : 64,774,865 – 64,775,422
557 bp 35 TFs 2 linked genes
This 557 bp open chromatin element is linked to CWC27 and SREK1IP1 and is bound by 35 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CWC27 5.9 kb Proximal Proximity
SREK1IP1 6.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:64,769,865 – 64,780,422
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
35 transcription factors
Source
Cell type
BRD3 1 dataset
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 303 bp overlap
BRD4 9 datasets
ChIP MOLM-14_DMSO GSE65138.BRD4.MOLM-14_DMSO 205 bp overlap
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 214 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 154 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 100 bp overlap
ChIP MV4-11-B_DMSO GSE101821.BRD4.MV4-11-B_DMSO 118 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 143 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 96 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 216 bp overlap
ChIP THP-1_iBET-BD2-PMA GSE138084.BRD4.THP-1_iBET-BD2-PMA 247 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 110 bp overlap
CDK9 1 dataset
ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 285 bp overlap
CEBPA 9 datasets
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 147 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.CEBPA.Kasumi-1_SIRUNX1ETO 61 bp overlap
ChIP SKH1_CEBPA-ER_E2 GSE102697.CEBPA.SKH1_CEBPA-ER_E2 79 bp overlap
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 54 bp overlap
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 114 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 112 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 123 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 88 bp overlap
ChIP THP-1_EtOH_8h GSE124032.CEBPA.THP-1_EtOH_8h 62 bp overlap
CEBPB 4 datasets
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-4h 79 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 87 bp overlap
ChIP monocyte_INFg GSE98367.CEBPB.monocyte_INFg 108 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.CEBPB.monocyte_MACROPHAGE 68 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 257 bp overlap
EP300 1 dataset
ChIP AML_shaml1-eto GSE131939.EP300.AML_shaml1-eto 56 bp overlap
ERG 2 datasets
ChIP SKNO-1 GSE23730.ERG.SKNO-1 96 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 165 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 89 bp overlap
FLI1 1 dataset
ChIP CTV-1_DSG GSE128835.FLI1.CTV-1_DSG 82 bp overlap
FOXA1 1 dataset
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 70 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 497 bp overlap
ChIP DE DE-FOXA2-2 467 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 401 bp overlap
ChIP DE DE-GATA4-2 444 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 361 bp overlap
ChIP DE DE-GATA6-2 463 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 414 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 313 bp overlap
JMJD1C 2 datasets
ChIP HL-60 GSE63484.JMJD1C.HL-60 78 bp overlap
ChIP THP-1 GSE63484.JMJD1C.THP-1 73 bp overlap
KDM5B 1 dataset
ChIP SUM159 GSE46055.KDM5B.SUM159 125 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 132 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 50 bp overlap
MAX 1 dataset
ChIP liver ENCSR521IID.MAX.liver 124 bp overlap
MECOM 1 dataset
ChIP SKH1_CEBPA-ER_E2 GSE102697.MECOM.SKH1_CEBPA-ER_E2 79 bp overlap
MYB 1 dataset
ChIP THP-1 GSE90769.MYB.THP-1 95 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 282 bp overlap
RAD21 1 dataset
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 82 bp overlap
RUNX1 4 datasets
ChIP Kasumi-1 GSE62847.RUNX1.Kasumi-1 106 bp overlap
ChIP MV4-11 GSE79899.RUNX1.MV4-11 136 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 70 bp overlap
ChIP THP-1 GSE79899.RUNX1.THP-1 159 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 426 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 334 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 338 bp overlap
SMARCA4 2 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 125 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 94 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 349 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 305 bp overlap
SPI1 5 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 62 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 104 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 95 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 57 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 63 bp overlap
STAT3 1 dataset
ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 142 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 79 bp overlap
ZNF143 1 dataset
ChIP HEK293T GSE39263.ZNF143.HEK293T 269 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 81 bp overlap