chr5 : 68,922,292 – 68,922,890
598 bp 63 TFs 5 linked genes
This 598 bp open chromatin element is linked to 5 target genes and is bound by 63 transcription factors.
Linked Genes
5 genes
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SLC30A5 171.4 kb Distal Multiome
CCNB1 244.6 kb Distal Multiome
CENPH 267.0 kb Distal Multiome
MRPS36 295.2 kb Distal Multiome
PIK3R1 706.8 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:68,917,292 – 68,927,890
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 435 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 565 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 420 bp overlap
BCL11A 3 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 187 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 260 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 270 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 267 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 286 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_50nM GSE120715.BRD2.MV4-11_IBET151_50nM 144 bp overlap
BRD4 1 dataset
ChIP HUVEC-C GSE60171.BRD4.HUVEC-C 165 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 235 bp overlap
CHD7 3 datasets
ChIP H1 ENCFF126NLU 426 bp overlap
ChIP H1 ENCFF126NLU 431 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 369 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 285 bp overlap
CREM 1 dataset
ChIP WTC11 ENCFF209ZUE 481 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 419 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 297 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 395 bp overlap
ChIP hESC GSE17917.EP300.hESC 541 bp overlap
ERG 1 dataset
ChIP WTC11 ENCFF011YUL 281 bp overlap
ETS1 1 dataset
ChIP hESC ENCSR534VHI.ETS1.hESC 165 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 437 bp overlap
EZH2 1 dataset
ChIP WA01 ENCSR000ASY.EZH2.WA01 268 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 146 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 377 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 575 bp overlap
HDAC2 4 datasets
ChIP H1 ENCFF353UJQ 251 bp overlap
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 512 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 187 bp overlap
JUN 5 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 263 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 501 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 598 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 598 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 598 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 94 bp overlap
KLF4 2 datasets
ChIP WA09 GSE105028.KLF4.WA09 550 bp overlap
ChIP hiPSC GSE56567.KLF4.hiPSC 406 bp overlap
LEF1 1 dataset
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 237 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 117 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 598 bp overlap
MYBL2 1 dataset
ChIP WTC11 ENCFF166TKT 497 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 186 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 598 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 598 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 598 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 550 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 598 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 598 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 598 bp overlap
ChIP hESC GSE18292.NANOG.hESC 321 bp overlap
ChIP hESC GSE20650.NANOG.hESC 285 bp overlap
NIPBL 6 datasets
ChIP WA09 GSE105028.NIPBL.WA09 598 bp overlap
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 292 bp overlap
ChIP hESC GSE64758.NIPBL.hESC 523 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 375 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 464 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 429 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 330 bp overlap
POLR2A 1 dataset
ChIP GM23338 ENCFF450WCS 491 bp overlap
POU5F1 13 datasets
ChIP BG03 GSE21614.POU5F1.BG03 208 bp overlap
ChIP GM23338 ENCFF333SNB 111 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 598 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 580 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 264 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 346 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 536 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 345 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 587 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 598 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 397 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 389 bp overlap
RAD21 2 datasets
ChIP WA09 GSE105028.RAD21.WA09 280 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 216 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 238 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000BIS.SIN3A.WA01 144 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 481 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 381 bp overlap
SMAD3 5 datasets
ChIP BG03 GSE21614.SMAD3.BG03 542 bp overlap
ChIP BG03 GSE36578.SMAD3.BG03 84 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 359 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 268 bp overlap
ChIP hESC GSE75297.SMAD3.hESC 302 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 592 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 598 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 470 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 574 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 598 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 272 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 540 bp overlap
SOX2 5 datasets
ChIP H9 GSE46837.SOX2.H9 241 bp overlap
ChIP hESC GSE69479.SOX2.hESC 486 bp overlap
ChIP hESC GSE18292.SOX2.hESC 222 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 558 bp overlap
ChIP hiPSC_3s2 GSE81899.SOX2.hiPSC_3s2 425 bp overlap
SP1 3 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 359 bp overlap
ChIP WTC11 ENCFF688PEU 501 bp overlap
SP4 1 dataset
ChIP H1 ENCFF473YOB 529 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 193 bp overlap
TAF7 1 dataset
ChIP H1 ENCFF061XZZ 337 bp overlap
TBP 6 datasets
ChIP hESC GSE122298.TBP.hESC 90 bp overlap
ChIP hESC GSE122298.TBP.hESC 251 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 119 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 172 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 272 bp overlap
ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 249 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 506 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 598 bp overlap
TEAD1 2 datasets
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 160 bp overlap
ChIP WTC11 ENCFF502QUV 405 bp overlap
TEAD4 4 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 598 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP WTC11 ENCFF114TZS 341 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 498 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 461 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 228 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 146 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 329 bp overlap
ZBTB43 1 dataset
ChIP WTC11 ENCFF058JUB 485 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 266 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 476 bp overlap
ZNF331 1 dataset
ChIP GM23338 ENCFF410NSZ 225 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF425 1 dataset
ChIP WTC11 ENCFF359IXT 301 bp overlap
ZNF462 3 datasets
ChIP GM23338 ENCFF896CCA 196 bp overlap
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 598 bp overlap