chr5 : 119,445,650 – 119,445,886
236 bp 37 TFs 2 linked genes
This 236 bp open chromatin element is linked to RNA5SP190 and HSD17B4 and is bound by 37 transcription factors.
Linked Genes
2 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RNA5SP190 at TSS At TSS Proximity
HSD17B4 6.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:119,440,650 – 119,450,886
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
AR 1 dataset
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 167 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 173 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 137 bp overlap
CHD2 1 dataset
ChIP WA01 ENCSR000EBT.CHD2.WA01 193 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 142 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 214 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 236 bp overlap
E2F1 2 datasets
ChIP HeLa GSE22478.E2F1.HeLa 161 bp overlap
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 161 bp overlap
EGR1 1 dataset
ChIP H1 ENCFF451BLH 169 bp overlap
ETS1 1 dataset
ChIP hESC ENCSR534VHI.ETS1.hESC 146 bp overlap
FEZF2 1 dataset
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_ENOB-2848 GSE128018.FOXA1.breast-cancer_ENOB-2848 172 bp overlap
GATA2 2 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 81 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 81 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 236 bp overlap
HAND2 1 dataset
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR000BMG.HDAC2.K-562 129 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 236 bp overlap
ChIP K562 ENCFF771OHZ 236 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 119 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 236 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 206 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 219 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 165 bp overlap
RAD21 2 datasets
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 59 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 127 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 180 bp overlap
RBM39 1 dataset
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 167 bp overlap
REST 2 datasets
ChIP H1 ENCFF429RUE 197 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 157 bp overlap
SIX5 1 dataset
ChIP WA01 ENCSR000BIQ.SIX5.WA01 153 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
TBP 5 datasets
ChIP H1 ENCFF859IIO 236 bp overlap
ChIP K-562 GSE55306.TBP.K-562 175 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 179 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 119 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 134 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 236 bp overlap
THAP1 1 dataset
ChIP K-562 ENCSR000BNN.THAP1.K-562 112 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 136 bp overlap
YY1AP1 1 dataset
ChIP HEK293_siCtrl GSE130135.YY1AP1.HEK293_siCtrl 236 bp overlap
ZNF143 5 datasets
ChIP MCF-7 GSE76454.ZNF143.MCF-7 157 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 235 bp overlap
ChIP WA09 GSE105028.ZNF143.WA09 236 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 217 bp overlap
ChIP WTC11 ENCFF249JUK 236 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 226 bp overlap