chr5 : 135,828,079 – 135,828,565
486 bp 23 TFs 2 linked genes
This 486 bp open chromatin element is linked to SLC25A48 and ENSG00000250378 and is bound by 23 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SLC25A48 6.1 kb Proximal Proximity
ENSG00000250378 6.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:135,823,079 – 135,833,565
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 150 bp overlap
ChIP breast_tumor_Male_26 GSE104399.AR.breast_tumor_Male_26 378 bp overlap
BRD4 3 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 152 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 207 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 167 bp overlap
CTCF 2 datasets
ChIP HT-1080 GSE135580.CTCF.HT-1080 206 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 65 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 445 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D5 GSE139377.ERG.aortic-endothelial-cell_D5 104 bp overlap
ESR1 9 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 168 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 151 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 168 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 310 bp overlap
ChIP SUM44PE_ESR1_wildtype GSE100074.ESR1.SUM44PE_ESR1_wildtype 464 bp overlap
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 292 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 183 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 418 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 461 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 486 bp overlap
ESR1_Y537S 2 datasets
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 262 bp overlap
ChIP T-47D_E2 GSE94493.ESR1_Y537S.T-47D_E2 197 bp overlap
EZH2 2 datasets
ChIP T98G GSE112240.EZH2.T98G 207 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 208 bp overlap
FOXA1 1 dataset
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 416 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 304 bp overlap
GATA1 2 datasets
ChIP K-562 GSE107726.GATA1.K-562 189 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 146 bp overlap
GATA2 7 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 171 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 171 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 195 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 279 bp overlap
ChIP SH-SY5Y ENCFF485YIB 308 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 249 bp overlap
ChIP hiPSC_SLC9ebs GSE107639.GATA2.hiPSC_SLC9ebs 189 bp overlap
GATA3 4 datasets
ChIP MCF-7 GSE51274.GATA3.MCF-7 204 bp overlap
ChIP NGP GSE65664.GATA3.NGP 222 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 486 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 204 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 408 bp overlap
ChIP DE DE-GATA4-2 486 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 275 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 321 bp overlap
ChIP DE DE-GATA6-2 397 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 240 bp overlap
GRHL2 2 datasets
ChIP MCF-7 GSE99680.GRHL2.MCF-7 140 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 298 bp overlap
PGR 5 datasets
ChIP T-47D GSE31129.PGR.T-47D 235 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 445 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 253 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 215 bp overlap
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 486 bp overlap
REST 7 datasets
ChIP H1 ENCFF429RUE 245 bp overlap
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 127 bp overlap
ChIP Hep-G2 ENCSR000BJL.REST.Hep-G2 97 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 179 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 134 bp overlap
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 194 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 210 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 404 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 260 bp overlap