chr6 : 14,296,854 – 14,297,404
550 bp 23 TFs 3 linked genes
This 550 bp open chromatin element is linked to LINC01108, ENSG00000286277, and CD83 and is bound by 23 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LINC01108 11.7 kb Distal Multiome
ENSG00000286277 134.6 kb Distal Multiome
CD83 179.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:14,291,854 – 14,302,404
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
Atoh1 1 dataset
Motif DE_24h DE_24h-Atoh1_MA1467.3 7 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 70 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCFF432ZEW 305 bp overlap
GATA6 1 dataset
ChIP DE_D1 S41-DE-d1-GATA6-exp2 386 bp overlap
HAND2 1 dataset
Motif DE_24h DE_24h-HAND2_MA1638.2 6 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 335 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 320 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 294 bp overlap
MAFK 1 dataset
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
NANOG 4 datasets
ChIP GM23338 ENCFF065NZG 278 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 308 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 227 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 550 bp overlap
ChIP GM23338 ENCFF333SNB 294 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 442 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 268 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 320 bp overlap
TEAD1 2 datasets
ChIP WTC11 ENCFF502QUV 405 bp overlap
ChIP WTC11 ENCFF502QUV 319 bp overlap
TWIST1 1 dataset
Motif DE_24h DE_24h-TWIST1_MA1123.3 8 bp overlap
ZNF16 2 datasets
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap
Motif DE_24h DE_24h-ZNF16_MA1654.2 21 bp overlap
ZNF396 1 dataset
ChIP WTC11 ENCFF776JWJ 180 bp overlap
ZNF416 1 dataset
Motif DE_24h DE_24h-ZNF416_MA1979.2 10 bp overlap