chr6 : 24,943,635 – 24,944,280
645 bp 15 TFs 2 linked genes
This 645 bp open chromatin element is linked to ENSG00000288887 and RIPOR2 and is bound by 15 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000288887 7.6 kb Proximal Proximity
RIPOR2 7.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:24,938,635 – 24,949,280
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
BRD4 3 datasets
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 250 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 241 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 188 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 440 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 268 bp overlap
FOXA1 1 dataset
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 132 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 645 bp overlap
ChIP DE DE-FOXA2-2 645 bp overlap
GATA1 1 dataset
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 110 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 592 bp overlap
ChIP DE DE-GATA4-2 645 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 559 bp overlap
ChIP DE DE-GATA6-2 639 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 308 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 441 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 423 bp overlap
RAD21 1 dataset
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 489 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 584 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 280 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 597 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 487 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 528 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 506 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 97 bp overlap