chr6 : 40,790,904 – 40,791,637
733 bp 134 TFs 2 linked genes
This 733 bp open chromatin element is linked to OARD1 and NFYA and is bound by 134 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
OARD1 281.3 kb Distal Multiome
NFYA 281.7 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:40,785,904 – 40,796,637
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
134 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 296 bp overlap
ARNTL 1 dataset
ChIP U2OS_trough_DMOG GSE85096.ARNTL.U2OS_trough_DMOG 240 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 247 bp overlap
ATOH7 1 dataset
Motif DE_24h DE_24h-ATOH7_MA1468.1 10 bp overlap
Ascl2 1 dataset
Motif DE_24h DE_24h-Ascl2_MA0816.1 10 bp overlap
Atf3 1 dataset
Motif DE_24h DE_24h-Atf3_MA1988.2 7 bp overlap
BACH1 2 datasets
Motif DE_24h DE_24h-BACH1_MA1633.2 9 bp overlap
ChIP SW1990 GSE124406.BACH1.SW1990 230 bp overlap
BACH2 1 dataset
Motif DE_24h DE_24h-BACH2_MA1101.3 11 bp overlap
BATF 1 dataset
Motif DE_24h DE_24h-BATF_MA1634.2 7 bp overlap
BATF3 1 dataset
Motif DE_24h DE_24h-BATF3_MA0835.3 7 bp overlap
BNC2 1 dataset
Motif DE_24h DE_24h-BNC2_MA1928.2 7 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 104 bp overlap
CREBBP 3 datasets
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 596 bp overlap
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 135 bp overlap
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 270 bp overlap
CRY1 1 dataset
ChIP U2OS_cordycepin GSE130506.CRY1.U2OS_cordycepin 293 bp overlap
CTCF 33 datasets
ChIP A-549 ENCSR000DPF.CTCF.A-549 173 bp overlap
ChIP AG10803 ENCFF549AQK 257 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 185 bp overlap
Motif DE_24h DE_24h-CTCF_MA1930.2 33 bp overlap
ChIP H54 ENCFF255TVO 225 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 253 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 170 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 287 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 231 bp overlap
ChIP Loucy ENCFF359TVQ 267 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 163 bp overlap
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF494VXA 231 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 209 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 269 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 208 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 184 bp overlap
ChIP endodermal cell ENCFF471YCZ 347 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 344 bp overlap
ChIP esophagus_squamous-epithelium ENCSR838RUX.CTCF.esophagus_squamous-epithelium 257 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 298 bp overlap
ChIP fibroblast_SKIN_ABDOMEN ENCSR000DPV.CTCF.fibroblast_SKIN_ABDOMEN 107 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 358 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 170 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 145 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 178 bp overlap
ChIP myotube ENCFF981UHL 328 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 170 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 239 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 284 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 275 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 480 bp overlap
ESR1 6 datasets
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 103 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 175 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 147 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 265 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 184 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 261 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 277 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 246 bp overlap
ESR1_Y537S 2 datasets
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 283 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537S.MCF-7_dox 347 bp overlap
ETS1 1 dataset
ChIP SCC-25 GSE109884.ETS1.SCC-25 447 bp overlap
EZH2 2 datasets
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 181 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 731 bp overlap
Esrrg 1 dataset
Motif DE_24h DE_24h-Esrrg_MA0643.2 9 bp overlap
FERD3L 1 dataset
Motif DE_24h DE_24h-FERD3L_MA1485.1 14 bp overlap
FEZF2 2 datasets
Motif DE_24h DE_24h-FEZF2_MA2341.1 8 bp overlap
Motif DE_24h DE_24h-FEZF2_MA2341.1 8 bp overlap
FLI1 2 datasets
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 235 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 209 bp overlap
FOS 1 dataset
Motif DE_24h DE_24h-FOS_MA0476.2 8 bp overlap
FOSL1 1 dataset
Motif DE_24h DE_24h-FOSL1_MA0477.3 9 bp overlap
FOSL2 1 dataset
Motif DE_24h DE_24h-FOSL2_MA0478.2 10 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 461 bp overlap
GATA1 1 dataset
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 114 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC9ebs GSE107639.GATA2.hiPSC_SLC9ebs 251 bp overlap
GATA4 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 616 bp overlap
ChIP DE DE-GATA4-2 665 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 668 bp overlap
ChIP DE DE-GATA6-2 601 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 728 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 716 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 683 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 733 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 733 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 733 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 581 bp overlap
GRHL2 3 datasets
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 200 bp overlap
ChIP PEO1 GSE71018.GRHL2.PEO1 125 bp overlap
ChIP PEO1 GSE71018.GRHL2.PEO1 343 bp overlap
HAND2 1 dataset
Motif DE_24h DE_24h-HAND2_MA1638.2 6 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 174 bp overlap
HIF1A 3 datasets
ChIP PC-3_hypoxia_siCtrl GSE106305.HIF1A.PC-3_hypoxia_siCtrl 220 bp overlap
ChIP U2OS_DMSO GSE85096.HIF1A.U2OS_DMSO 405 bp overlap
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 315 bp overlap
Hnf1A 1 dataset
Motif DE_24h DE_24h-Hnf1A_MA1991.2 10 bp overlap
IKZF1 2 datasets
ChIP BCR-ABL1_LAX2 GSE58825.IKZF1.BCR-ABL1_LAX2 229 bp overlap
Motif DE_24h DE_24h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
JUN 8 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 683 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 456 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 646 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 690 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 386 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 676 bp overlap
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 277 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 188 bp overlap
JUNB 1 dataset
Motif DE_24h DE_24h-JUNB_MA0490.3 9 bp overlap
JUND 1 dataset
Motif DE_24h DE_24h-JUND_MA0491.3 9 bp overlap
Jun 1 dataset
Motif DE_24h DE_24h-Jun_MA0489.3 8 bp overlap
KDM1A 1 dataset
ChIP keratinocyte_diff GSE57702.KDM1A.keratinocyte_diff 205 bp overlap
KLF16 1 dataset
Motif DE_24h DE_24h-KLF16_MA0741.1 11 bp overlap
KLF17 1 dataset
Motif DE_24h DE_24h-KLF17_MA1514.2 14 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 597 bp overlap
KLF4 3 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 263 bp overlap
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 126 bp overlap
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 286 bp overlap
KLF5 3 datasets
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
ChIP GP5D GSE51234.KLF5.GP5D 331 bp overlap
ChIP HCC95_E419Q GSE88976.KLF5.HCC95_E419Q 193 bp overlap
KLF9 1 dataset
Motif DE_24h DE_24h-KLF9_MA1107.3 11 bp overlap
Lef1 1 dataset
Motif DE_24h DE_24h-Lef1_MA0768.3 8 bp overlap
MAFG 1 dataset
ChIP K-562 ENCSR818DQV.MAFG.K-562 340 bp overlap
MAFK 1 dataset
Motif DE_24h DE_24h-MAFK_MA0496.4 10 bp overlap
MGA 1 dataset
Motif DE_24h DE_24h-MGA_MA0801.1 8 bp overlap
Mafg 1 dataset
Motif DE_24h DE_24h-Mafg_MA0659.4 12 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 733 bp overlap
NEUROG2 1 dataset
Motif DE_24h DE_24h-NEUROG2_MA0669.1 10 bp overlap
NFE2 1 dataset
ChIP K-562 ENCSR000FCC.NFE2.K-562 132 bp overlap
NIPBL 2 datasets
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 206 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 479 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 177 bp overlap
Nfat5 1 dataset
Motif DE_24h DE_24h-Nfat5_MA0606.3 8 bp overlap
Nfatc2 1 dataset
Motif DE_24h DE_24h-Nfatc2_MA0152.3 8 bp overlap
Nfe2l2 1 dataset
Motif DE_24h DE_24h-Nfe2l2_MA0150.3 11 bp overlap
OLIG1 1 dataset
Motif DE_24h DE_24h-OLIG1_MA0826.1 10 bp overlap
PBX3 1 dataset
Motif DE_24h DE_24h-PBX3_MA1114.2 11 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 191 bp overlap
PKNOX1 2 datasets
Motif DE_24h DE_24h-PKNOX1_MA0782.3 10 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 221 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 421 bp overlap
PRDM9 1 dataset
Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap
Plagl1 1 dataset
Motif DE_24h DE_24h-Plagl1_MA1615.2 8 bp overlap
Prdm15 1 dataset
Motif DE_24h DE_24h-Prdm15_MA1616.2 11 bp overlap
Ptf1A 1 dataset
Motif DE_24h DE_24h-Ptf1A_MA1618.2 9 bp overlap
RBPJ 1 dataset
Motif DE_24h DE_24h-RBPJ_MA1116.2 6 bp overlap
SCRT1 1 dataset
Motif DE_24h DE_24h-SCRT1_MA0743.3 10 bp overlap
SCRT2 1 dataset
Motif DE_24h DE_24h-SCRT2_MA0744.3 10 bp overlap
SIX1 1 dataset
Motif DE_24h DE_24h-SIX1_MA1118.2 9 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 727 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 733 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 733 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 656 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 721 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 733 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 712 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 714 bp overlap
SMAD3 3 datasets
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 140 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 143 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 250 bp overlap
SMARCA4 9 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 156 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 59 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 59 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 144 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 53 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 341 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 520 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 328 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 251 bp overlap
SMARCC1 5 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 259 bp overlap
ChIP DE_D1 S10-DE-d1-BAF155-exp1 489 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 533 bp overlap
ChIP TTC-1240 GSE124903.SMARCC1.TTC-1240 483 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 160 bp overlap
SMC1 1 dataset
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.SMC1.HCT-116_RAD21-mAC_500uM_auxin 286 bp overlap
SMC1A 2 datasets
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 264 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d6 237 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 436 bp overlap
SP3 1 dataset
Motif DE_24h DE_24h-SP3_MA0746.3 11 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 394 bp overlap
Six4 1 dataset
Motif DE_24h DE_24h-Six4_MA2001.2 7 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 381 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 511 bp overlap
TBX1 1 dataset
Motif DE_24h DE_24h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_24h DE_24h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_24h DE_24h-TBX18_MA1565.2 9 bp overlap
TBX20 1 dataset
Motif DE_24h DE_24h-TBX20_MA0689.1 11 bp overlap
TBX5 1 dataset
Motif DE_24h DE_24h-TBX5_MA0807.1 8 bp overlap
TCF7L2 5 datasets
Motif DE_24h DE_24h-TCF7L2_MA0523.2 9 bp overlap
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 512 bp overlap
ChIP HCT-116_sc2 GSE127960.TCF7L2.HCT-116_sc2 215 bp overlap
ChIP HCT116 ENCFF038POZ 371 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 256 bp overlap
TEAD1 1 dataset
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 199 bp overlap
TEAD4 1 dataset
ChIP SNU-216 GSE44416.TEAD4.SNU-216 426 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 410 bp overlap
THAP1 1 dataset
Motif DE_24h DE_24h-THAP1_MA0597.3 8 bp overlap
TP53 3 datasets
ChIP GM06170 GSE55727.TP53.GM06170 299 bp overlap
ChIP MCF-7_nutlin GSE86164.TP53.MCF-7_nutlin 301 bp overlap
ChIP keratinocyte_CISP GSE56674.TP53.keratinocyte_CISP 205 bp overlap
TP63 4 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 169 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 443 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 215 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 267 bp overlap
Tbx6 1 dataset
Motif DE_24h DE_24h-Tbx6_MA1567.3 9 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 308 bp overlap
ZNF213 1 dataset
Motif DE_24h DE_24h-ZNF213_MA2121.1 12 bp overlap
ZNF317 1 dataset
Motif DE_24h DE_24h-ZNF317_MA1593.2 8 bp overlap
ZNF354A 1 dataset
Motif DE_24h DE_24h-ZNF354A_MA1978.2 20 bp overlap
ZNF574 1 dataset
Motif DE_24h DE_24h-ZNF574_MA1982.2 14 bp overlap
ZNF701 1 dataset
Motif DE_24h DE_24h-ZNF701_MA1987.2 17 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 268 bp overlap
Zfp809 2 datasets
Motif DE_24h DE_24h-Zfp809_MA2125.1 9 bp overlap
Motif DE_24h DE_24h-Zfp809_MA2125.1 9 bp overlap