chr6 : 57,813,319 – 57,813,959
640 bp 58 TFs 2 linked genes
This 640 bp open chromatin element is linked to ENSG00000272316 and LINC00680 and is bound by 58 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000272316 100.3 kb Distal Multiome
LINC00680 147.7 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:57,808,319 – 57,818,959
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
58 transcription factors
Source
Cell type
ASCL1 1 dataset
Motif ES_0h ES_0h-ASCL1_MA1631.2 9 bp overlap
ASH2L 1 dataset
ChIP H1 ENCFF399KAM 357 bp overlap
ATF3 1 dataset
ChIP K562 ENCFF965VXT 237 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCFF432ZEW 305 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 398 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 176 bp overlap
EBF3 1 dataset
Motif DE_12h DE_12h-EBF3_MA1637.2 9 bp overlap
ELF1 6 datasets
ChIP GM12878 ENCFF432UGA 259 bp overlap
ChIP HepG2 ENCFF367ZWV 242 bp overlap
ChIP HepG2 ENCFF838BCU 223 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 116 bp overlap
ChIP K562 ENCFF457KVR 306 bp overlap
ChIP K562 ENCFF496AKI 101 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 399 bp overlap
Ebf2 1 dataset
Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap
FERD3L 1 dataset
Motif ES_0h ES_0h-FERD3L_MA1485.1 14 bp overlap
FIGLA 1 dataset
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
GATA2 2 datasets
Motif ES_0h ES_0h-GATA2_MA0036.4 7 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 272 bp overlap
GATA4 1 dataset
Motif ES_0h ES_0h-GATA4_MA0482.3 8 bp overlap
GATA5 1 dataset
Motif ES_0h ES_0h-GATA5_MA0766.3 8 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 189 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 216 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 552 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 361 bp overlap
Motif ES_0h ES_0h-GATA6_MA1104.3 8 bp overlap
Gata3 1 dataset
Motif ES_0h ES_0h-Gata3_MA0037.5 8 bp overlap
HAND2 1 dataset
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
Hnf1A 1 dataset
Motif ES_0h ES_0h-Hnf1A_MA1991.2 10 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 179 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF7 1 dataset
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
L3MBTL2 2 datasets
ChIP HEK293T ENCFF482NJV 323 bp overlap
ChIP K562 ENCFF320EQC 409 bp overlap
MAX 1 dataset
ChIP WTC11 ENCFF223QFY 437 bp overlap
NHLH2 1 dataset
Motif ES_0h ES_0h-NHLH2_MA1529.2 16 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
PATZ1 1 dataset
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
POLR2H 1 dataset
ChIP K562 ENCFF377NHG 311 bp overlap
POLR3A 1 dataset
ChIP K562 ENCFF452GCM 207 bp overlap
Ptf1A 1 dataset
Motif ES_0h ES_0h-Ptf1A_MA1618.2 9 bp overlap
REST 1 dataset
ChIP H1 ENCFF429RUE 76 bp overlap
SNAI1 1 dataset
Motif ES_0h ES_0h-SNAI1_MA1558.2 7 bp overlap
SP1 1 dataset
Motif ES_0h ES_0h-SP1_MA0079.5 9 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
TBP 10 datasets
ChIP H1 ENCFF859IIO 291 bp overlap
ChIP HBTEC_MOI20_18hpi GSE116772.TBP.HBTEC_MOI20_18hpi 176 bp overlap
ChIP K-562 GSE55306.TBP.K-562 317 bp overlap
ChIP K-562 ENCSR000EHA.TBP.K-562 191 bp overlap
ChIP K562 ENCFF901UYM 381 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 237 bp overlap
ChIP hESC GSE122298.TBP.hESC 220 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 179 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 194 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 164 bp overlap
TCF12 1 dataset
Motif ES_0h ES_0h-TCF12_MA1648.2 7 bp overlap
TCF3 1 dataset
Motif ES_0h ES_0h-TCF3_MA0522.4 7 bp overlap
TCF7L1 1 dataset
Motif ES_0h ES_0h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 3 datasets
ChIP HEK293 ENCFF513JQN 304 bp overlap
ChIP PANC-1 ENCSR000EXL.TCF7L2.PANC-1 218 bp overlap
ChIP Panc1 ENCFF829HHL 375 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
TRIM28 3 datasets
ChIP HEK293 ENCFF265CEM 621 bp overlap
ChIP HEK293 ENCFF265CEM 395 bp overlap
ChIP HEK293 ENCFF582MWI 592 bp overlap
TRPS1 1 dataset
Motif ES_0h ES_0h-TRPS1_MA1970.2 8 bp overlap
TWIST1 1 dataset
Motif ES_0h ES_0h-TWIST1_MA1123.3 8 bp overlap
Wt1 1 dataset
Motif ES_0h ES_0h-Wt1_MA1627.2 10 bp overlap
ZEB1 1 dataset
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZNF148 1 dataset
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF24 1 dataset
ChIP K562 ENCFF877JCX 202 bp overlap
ZNF281 1 dataset
Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap
ZNF460 1 dataset
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCFF896CCA 151 bp overlap
ZNF677 1 dataset
Motif ES_0h ES_0h-ZNF677_MA2101.1 12 bp overlap
ZNF708 1 dataset
Motif ES_0h ES_0h-ZNF708_MA1730.2 9 bp overlap