chr6 : 83,200,602 – 83,200,767
165 bp 3 TFs 2 linked genes
This 165 bp open chromatin element is linked to RWDD2A and PGM3 and is bound by GATA6, JUN, and SMAD2-3.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RWDD2A 7.2 kb Proximal Proximity
PGM3 7.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:83,195,602 – 83,205,767
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
3 transcription factors
Source
Cell type
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 165 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 165 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 104 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 152 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 165 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 131 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 165 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 165 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 158 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 152 bp overlap