chr6 : 87,320,722 – 87,321,018
296 bp 41 TFs 2 linked genes
This 296 bp open chromatin element is linked to SMIM8 and GJB7 and is bound by 41 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SMIM8 1.6 kb Proximal Proximity
GJB7 8.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:87,315,722 – 87,326,018
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 296 bp overlap
ChIP K562 ENCFF938UXQ 296 bp overlap
ARNT 1 dataset
ChIP K-562 ENCSR155KHM.ARNT.K-562 203 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 222 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 277 bp overlap
ChIP K562 ENCFF963TXY 208 bp overlap
CBFA2T3 3 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 296 bp overlap
ChIP K-562 GSE142227.CBFA2T3.K-562 146 bp overlap
ChIP K562 ENCFF673OEZ 296 bp overlap
DMTF1 1 dataset
ChIP K562 ENCFF947QUY 222 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 281 bp overlap
EGR1 6 datasets
ChIP K-562 ENCSR211LTF.EGR1.K-562 296 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 246 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 183 bp overlap
ChIP K562 ENCFF006PJY 212 bp overlap
ChIP K562 ENCFF113OPQ 296 bp overlap
ChIP K562 ENCFF895KGN 99 bp overlap
EP300 1 dataset
ChIP K-562 ENCSR000EGE.EP300.K-562 165 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 227 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 221 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 219 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 256 bp overlap
GATA2 1 dataset
ChIP K-562 ENCSR000BKM.GATA2.K-562 190 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 296 bp overlap
ChIP DE DE-GATA4-2 296 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 296 bp overlap
ChIP DE DE-GATA6-2 296 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 258 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 296 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 234 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 155 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 296 bp overlap
ChIP K562 ENCFF744ALD 103 bp overlap
IKZF1 2 datasets
ChIP K562 ENCFF771OHZ 296 bp overlap
ChIP K562 ENCFF771OHZ 111 bp overlap
KDM1A 2 datasets
ChIP K-562 ENCSR908CMW.KDM1A.K-562 264 bp overlap
ChIP K562 ENCFF128TYE 270 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 212 bp overlap
NCOR1 3 datasets
ChIP K-562 ENCSR910JAI.NCOR1.K-562 243 bp overlap
ChIP K-562 ENCSR798ILC.NCOR1.K-562 256 bp overlap
ChIP K562 ENCFF788MPU 296 bp overlap
POLR2H 1 dataset
ChIP K562 ENCFF377NHG 296 bp overlap
POLR3A 2 datasets
ChIP K562 ENCFF452GCM 283 bp overlap
ChIP K562 ENCFF452GCM 83 bp overlap
PRDM10 2 datasets
ChIP K-562 ENCSR120MPG.PRDM10.K-562 173 bp overlap
ChIP K562 ENCFF740YLK 243 bp overlap
REST 1 dataset
ChIP K-562 ENCSR000BMW.REST.K-562 124 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 226 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 296 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 274 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 296 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 296 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 232 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 295 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 296 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 209 bp overlap
ChIP K562 ENCFF059YCJ 294 bp overlap
TAL1 9 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 279 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 244 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 193 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 206 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 244 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 228 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 277 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 196 bp overlap
ChIP K562 ENCFF620GMX 187 bp overlap
TBP 3 datasets
ChIP K-562 ENCSR000EHA.TBP.K-562 220 bp overlap
ChIP K562 ENCFF901UYM 144 bp overlap
ChIP K562 ENCFF901UYM 78 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 296 bp overlap
ChIP K562 ENCFF931DJY 230 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 256 bp overlap
ChIP K562 ENCFF319QZT 296 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 296 bp overlap
TRIM24 2 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 275 bp overlap
ChIP K-562 ENCSR957LDM.TRIM24.K-562 231 bp overlap
ZNF24 2 datasets
ChIP K-562 ENCSR695EQB.ZNF24.K-562 204 bp overlap
ChIP K562 ENCFF877JCX 141 bp overlap
ZNF281 2 datasets
ChIP K562 ENCFF594VNM 296 bp overlap
ChIP K562 ENCFF594VNM 161 bp overlap