chr6 : 110,173,972 – 110,174,206
234 bp 36 TFs 2 linked genes
This 234 bp open chromatin element is linked to WASF1 and CDC40 and is bound by 36 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
WASF1 5.5 kb Proximal Proximity
CDC40 6.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:110,168,972 – 110,179,206
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 181 bp overlap
BRD4 2 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 197 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 234 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 59 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 196 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 79 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 234 bp overlap
ChIP DE DE-FOXA2-2 234 bp overlap
GATA2 4 datasets
ChIP SH-SY5Y ENCFF485YIB 155 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 177 bp overlap
ChIP SK-N-SH ENCFF764OZD 121 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 69 bp overlap
GATA3 4 datasets
ChIP Kelly GSE65664.GATA3.Kelly 84 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 124 bp overlap
ChIP SH-SY5Y ENCFF475HYF 206 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 188 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 234 bp overlap
ChIP DE DE-GATA4-2 234 bp overlap
ChIP HepG2 ENCFF309FOQ 94 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 157 bp overlap
ChIP DE DE-GATA6-2 234 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 202 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 148 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 187 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 158 bp overlap
MAX 1 dataset
ChIP HepG2 ENCFF507HCX 64 bp overlap
MEF2D 1 dataset
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 214 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 170 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 213 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 234 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 224 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 234 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 211 bp overlap
RBFOX2 2 datasets
ChIP HepG2 ENCFF554DMZ 116 bp overlap
ChIP HepG2 ENCFF554DMZ 234 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 64 bp overlap
REST 1 dataset
ChIP Hep-G2 ENCSR000BOT.REST.Hep-G2 181 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 127 bp overlap
SMARCA4 2 datasets
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 141 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 234 bp overlap
SOX6 1 dataset
ChIP HepG2 ENCFF767OCK 96 bp overlap
SPI1 2 datasets
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 126 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 147 bp overlap
TBX2 2 datasets
ChIP HepG2 ENCFF811TLA 59 bp overlap
ChIP Kelly GSE94822.TBX2.Kelly 211 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 188 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 188 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 87 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 144 bp overlap
ZNF519 1 dataset
ChIP HEK293T GSE78099.ZNF519.HEK293T 107 bp overlap
ZNF555 1 dataset
ChIP HEK293T GSE78099.ZNF555.HEK293T 220 bp overlap
ZNF766 1 dataset
ChIP HEK293T GSE78099.ZNF766.HEK293T 195 bp overlap
ZNF777 1 dataset
ChIP HepG2 ENCFF362XDA 225 bp overlap