chr6 : 116,110,364 – 116,110,682
318 bp 9 TFs 2 linked genes
This 318 bp open chromatin element is linked to NT5DC1 and ENSG00000289376 and is bound by 9 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
NT5DC1 9.5 kb Proximal Proximity
ENSG00000289376 9.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:116,105,364 – 116,115,682
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
9 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 163 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 213 bp overlap
BRD4 1 dataset
ChIP 22Rv1_DHT-DMSO GSE118247.BRD4.22Rv1_DHT-DMSO 285 bp overlap
CTCF 1 dataset
ChIP AG09309 ENCFF478XPS 82 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 126 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 318 bp overlap
ChIP DE DE-FOXA2-2 318 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 248 bp overlap
ChIP DE DE-GATA4-2 318 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 231 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 273 bp overlap
ChIP DE DE-GATA6-2 291 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 168 bp overlap