chr6 : 132,825,197 – 132,825,946
749 bp 11 TFs 2 linked genes
This 749 bp open chromatin element is linked to SNORA33 and SNORD101 and is bound by 11 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SNORA33 8.0 kb Proximal Proximity
SNORD101 9.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:132,820,197 – 132,830,946
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
11 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 597 bp overlap
BRD4 1 dataset
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 175 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 127 bp overlap
CTCF 9 datasets
ChIP A-673 ENCSR611JJS.CTCF.A-673 200 bp overlap
ChIP CD4-positive, alpha-beta T cell ENCFF277LDE 137 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 206 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 245 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 55 bp overlap
ChIP PC-9 ENCFF539ULB 61 bp overlap
ChIP brain ENCFF163BBN 98 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF631JNO 68 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 212 bp overlap
ESR1 1 dataset
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 281 bp overlap
NANOG 1 dataset
ChIP LNCaP_pNanog8_Dox GSE74799.NANOG.LNCaP_pNanog8_Dox 149 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 210 bp overlap
SMARCA4 3 datasets
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 357 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 373 bp overlap
ChIP TTC-1240_empty GSE124903.SMARCA4.TTC-1240_empty 561 bp overlap
SMARCC1 3 datasets
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 219 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 422 bp overlap
ChIP TTC-1240_empty GSE124903.SMARCC1.TTC-1240_empty 408 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 322 bp overlap