chr6 : 133,890,721 – 133,890,851
130 bp 28 TFs 2 linked genes
This 130 bp open chromatin element is linked to TCF21 and TARID and is bound by 28 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TCF21 1.6 kb Proximal Proximity
TARID 1.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:133,885,721 – 133,895,851
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
BMI1 1 dataset
ChIP MCF-7 ENCSR966YYJ.BMI1.MCF-7 71 bp overlap
BRD2 1 dataset
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 130 bp overlap
BRD4 3 datasets
ChIP HEK293T GSE39579.BRD4.HEK293T 74 bp overlap
ChIP HFOB_DIFF GSE82295.BRD4.HFOB_DIFF 105 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 90 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 130 bp overlap
CBX8 3 datasets
ChIP H1 ENCFF095JHA 130 bp overlap
ChIP H1 ENCFF095JHA 130 bp overlap
ChIP K562 ENCFF485TBL 130 bp overlap
CTCF 1 dataset
ChIP ovary ENCFF859AKQ 130 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 114 bp overlap
EZH2 10 datasets
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 126 bp overlap
ChIP GM23248 ENCFF506FWX 53 bp overlap
ChIP GM23338 ENCFF613YON 130 bp overlap
ChIP H1 ENCFF232NZA 130 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 95 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 124 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 119 bp overlap
ChIP hepatocyte ENCFF552DZB 61 bp overlap
ChIP neural progenitor cell ENCFF018MKA 130 bp overlap
ChIP neural progenitor cell ENCFF472NFV 130 bp overlap
FOXA1 2 datasets
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 57 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 56 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 130 bp overlap
ChIP DE DE-FOXA2-2 130 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 130 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 130 bp overlap
ChIP DE DE-GATA4-2 130 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 130 bp overlap
ChIP foregut GSE117136.GATA4.foregut 130 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 130 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 130 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 130 bp overlap
ChIP DE DE-GATA6-2 130 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 130 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 130 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 130 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 130 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 130 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 116 bp overlap
ChIP foregut GSE117136.GATA6.foregut 130 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 130 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 130 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 130 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 130 bp overlap
JARID2 4 datasets
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 68 bp overlap
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 94 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 130 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 130 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 126 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 130 bp overlap
PCGF2 1 dataset
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 79 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 107 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 130 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 130 bp overlap
RING1 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.RING1.SYO-1_shRING1A-B 76 bp overlap
RNF2 2 datasets
ChIP K-562 ENCSR076YPO.RNF2.K-562 89 bp overlap
ChIP hMSC_D10 GSE125166.RNF2.hMSC_D10 113 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 130 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 125 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 130 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 130 bp overlap
ChIP TTC-1240_empty GSE124903.SMARCC1.TTC-1240_empty 130 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 103 bp overlap
SUZ12 2 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 103 bp overlap
ChIP H1 ENCFF881NFR 130 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 130 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 113 bp overlap