chr1 : 119,651,267 – 119,651,393
126 bp 14 TFs 2 linked genes
This 126 bp open chromatin element is linked to PHGDH and ZNF697 and is bound by 14 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PHGDH 2.9 kb Proximal Proximity
ZNF697 3.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:119,646,267 – 119,656,393
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP SGBS_TNF GSE64233.BRD4.SGBS_TNF 126 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 126 bp overlap
ESRRA 6 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 126 bp overlap
ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 126 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 126 bp overlap
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 126 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 126 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 126 bp overlap
EZH2 2 datasets
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 126 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 92 bp overlap
MED1 1 dataset
ChIP SGBS GSE64233.MED1.SGBS 126 bp overlap
PRDM1 2 datasets
ChIP HEK293 ENCFF302TBP 126 bp overlap
ChIP HEK293 GSE76494.PRDM1.HEK293 97 bp overlap
RELA 3 datasets
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 126 bp overlap
ChIP IMR-90_TNF GSE43070.RELA.IMR-90_TNF 126 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 99 bp overlap
RNF2 5 datasets
ChIP K-562 ENCSR820GND.RNF2.K-562 104 bp overlap
ChIP K-562 ENCSR076YPO.RNF2.K-562 119 bp overlap
ChIP K-562 ENCSR138FUZ.RNF2.K-562 126 bp overlap
ChIP K562 ENCFF653BQJ 72 bp overlap
ChIP K562 ENCFF653BQJ 75 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 117 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 126 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 126 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 126 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 126 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 126 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 126 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 126 bp overlap
SMARCA4 1 dataset
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 68 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 126 bp overlap