chr6 : 157,708,186 – 157,708,676
490 bp 16 TFs 3 linked genes
This 490 bp open chromatin element is linked to SNX9, SYNJ2, and ZDHHC14 and is bound by 16 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SNX9 114.8 kb Distal Multiome
SYNJ2 273.4 kb Distal Multiome
ZDHHC14 327.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:157,703,186 – 157,713,676
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP K562 ENCFF751HCS 456 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 144 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 328 bp overlap
GATA2 2 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 278 bp overlap
ChIP K562 ENCFF830LLA 490 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 204 bp overlap
MITF 2 datasets
ChIP K-562 ENCSR797SWM.MITF.K-562 216 bp overlap
ChIP K562 ENCFF731XJJ 425 bp overlap
NANOG 7 datasets
ChIP GM23338 ENCFF065NZG 293 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 434 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 438 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 490 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 490 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 218 bp overlap
ChIP hESC GSE18292.NANOG.hESC 179 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 203 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 234 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 386 bp overlap
SMAD2 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 432 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 248 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 338 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 98 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 330 bp overlap
TBX5 6 datasets
ChIP G296S GSE85628.TBX5.G296S 86 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 86 bp overlap
ChIP cardiomyocyte GSE85628.TBX5.cardiomyocyte 70 bp overlap
ChIP cardiomyocyte GSE85628.TBX5.cardiomyocyte 142 bp overlap
ChIP cardiomyocyte_1 GSE85628.TBX5.cardiomyocyte_1 70 bp overlap
ChIP cardiomyocyte_1 GSE85628.TBX5.cardiomyocyte_1 142 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 213 bp overlap
ZNF318 1 dataset
ChIP K562 ENCFF696TLC 191 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 180 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 83 bp overlap