chr6 : 160,877,554 – 160,878,055
501 bp 62 TFs 3 linked genes
This 501 bp open chromatin element is linked to ENSG00000224371, ENSG00000292246, and MAP3K4 and is bound by 62 transcription factors.
Linked Genes
3 genes
Distance
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000224371 2.3 kb Proximal Proximity
ENSG00000292246 5.2 kb Proximal Proximity
MAP3K4 113.9 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:160,872,554 – 160,883,055
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
62 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 134 bp overlap
BCL11A 2 datasets
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 265 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 136 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 303 bp overlap
CREM 1 dataset
ChIP WTC11 ENCFF209ZUE 256 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 438 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 258 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 468 bp overlap
ChIP DE DE-FOXA2-2 416 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 124 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 377 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 478 bp overlap
ChIP DE DE-GATA4-2 501 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 474 bp overlap
ChIP DE DE-GATA6-2 501 bp overlap
ChIP foregut GSE117136.GATA6.foregut 261 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 172 bp overlap
HSF1 1 dataset
Motif ES_0h ES_0h-HSF1_MA0486.2 13 bp overlap
HSF2 1 dataset
Motif ES_0h ES_0h-HSF2_MA0770.1 13 bp overlap
HSF4 1 dataset
Motif ES_0h ES_0h-HSF4_MA0771.1 13 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 347 bp overlap
MYB 1 dataset
Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap
MYBL1 1 dataset
Motif ES_0h ES_0h-MYBL1_MA0776.1 12 bp overlap
NANOG 9 datasets
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 423 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 330 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 312 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 501 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 338 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 312 bp overlap
ChIP hESC GSE20650.NANOG.hESC 254 bp overlap
ChIP hESC GSE18292.NANOG.hESC 99 bp overlap
NFATC3 1 dataset
Motif ES_0h ES_0h-NFATC3_MA0625.3 6 bp overlap
NFIA 1 dataset
ChIP K-562 GSE97661.NFIA.K-562 149 bp overlap
NFIC 2 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 245 bp overlap
ChIP K562 ENCFF167YID 232 bp overlap
NFIX 1 dataset
ChIP K562 ENCFF382SJS 179 bp overlap
Nfatc1 1 dataset
Motif ES_0h ES_0h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif ES_0h ES_0h-Nfatc2_MA0152.3 8 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
POU5F1 8 datasets
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 398 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 303 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 501 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 194 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 332 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 383 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap
REST 1 dataset
ChIP HEK293 ENCFF073DOT 199 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 501 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 264 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 411 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 329 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 363 bp overlap
SOX10 1 dataset
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 389 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 424 bp overlap
SOX4 1 dataset
Motif ES_0h ES_0h-SOX4_MA0867.3 8 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 319 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 197 bp overlap
STAT1 1 dataset
Motif ES_0h ES_0h-STAT1_MA0137.4 9 bp overlap
Sox11 1 dataset
Motif ES_0h ES_0h-Sox11_MA0869.3 8 bp overlap
Sox6 1 dataset
Motif ES_0h ES_0h-Sox6_MA0515.1 10 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 375 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 272 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 173 bp overlap
ZBTB11 2 datasets
ChIP HEK293 ENCFF262GZJ 97 bp overlap
ChIP HEK293 ENCSR882ZTS.ZBTB11.HEK293 132 bp overlap
ZBTB26 1 dataset
Motif ES_0h ES_0h-ZBTB26_MA1579.2 8 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 70 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 128 bp overlap
ZC3H11A 1 dataset
ChIP A549 ENCFF640AQE 96 bp overlap
ZNF140 1 dataset
ChIP HEK293 ENCFF501RUF 152 bp overlap
ZNF266 1 dataset
ChIP HEK293 ENCFF483FIW 144 bp overlap
ZNF34 2 datasets
ChIP HEK293 ENCFF481TFV 182 bp overlap
ChIP HEK293 ENCSR727PIC.ZNF34.HEK293 185 bp overlap
ZNF394 2 datasets
ChIP HEK293 ENCFF236OPX 136 bp overlap
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 191 bp overlap
ZNF426 2 datasets
ChIP HEK293 ENCFF957XYN 192 bp overlap
ChIP HEK293 ENCSR224NFP.ZNF426.HEK293 213 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 231 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 154 bp overlap
ZNF518A 2 datasets
ChIP HEK293 ENCFF892ULS 61 bp overlap
ChIP HEK293 ENCSR159GFL.ZNF518A.HEK293 146 bp overlap
ZNF555 2 datasets
ChIP HEK293 ENCFF406QFI 70 bp overlap
ChIP HEK293 ENCSR767XSF.ZNF555.HEK293 132 bp overlap
ZNF654 1 dataset
ChIP HEK293 ENCFF636WIC 158 bp overlap