chr6 : 162,733,549 – 162,733,753
204 bp 16 TFs 2 linked genes
This 204 bp open chromatin element is linked to PRKN and PACRG and is bound by 16 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PRKN 5.9 kb Proximal Proximity
PACRG 6.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:162,728,549 – 162,738,753
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
BRD2 2 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 112 bp overlap
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 204 bp overlap
BRD4 3 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 204 bp overlap
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 200 bp overlap
ChIP T-cell_iBET GSE138084.BRD4.T-cell_iBET 179 bp overlap
CDK8 1 dataset
ChIP SET-2 GSE65138.CDK8.SET-2 115 bp overlap
CTCF 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 204 bp overlap
GABPA 8 datasets
ChIP HL-60 ENCFF515BEZ 202 bp overlap
ChIP HL-60 ENCSR000BTK.GABPA.HL-60 162 bp overlap
ChIP Hep-G2 ENCSR000BJK.GABPA.Hep-G2 192 bp overlap
ChIP Hep-G2 ENCSR269TNX.GABPA.Hep-G2 182 bp overlap
ChIP Hep-G2 GSE72082.GABPA.Hep-G2 150 bp overlap
ChIP HepG2 ENCFF180FFY 148 bp overlap
ChIP HepG2 ENCFF467OEO 204 bp overlap
ChIP K-562 ENCSR290MUH.GABPA.K-562 136 bp overlap
GABPB1 2 datasets
ChIP HepG2 ENCFF315AWN 204 bp overlap
ChIP K-562 ENCSR138YYY.GABPB1.K-562 136 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 126 bp overlap
ChIP HepG2 ENCFF854JLR 202 bp overlap
KLF4 2 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 125 bp overlap
ChIP hiPSC GSE56567.KLF4.hiPSC 117 bp overlap
KMT2B 2 datasets
ChIP AML GSE112074.KMT2B.AML 181 bp overlap
ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 204 bp overlap
MYB 1 dataset
ChIP THP-1 GSE90769.MYB.THP-1 127 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF044PYR 134 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SPI1 5 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 178 bp overlap
ChIP HL-60 ENCFF645GBT 186 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 125 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 115 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 195 bp overlap