chr7 : 6,346,414 – 6,346,983
569 bp 30 TFs 2 linked genes
This 569 bp open chromatin element is linked to FAM220A and SAGSIN1 and is bound by 30 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
FAM220A 2.0 kb Proximal Proximity
SAGSIN1 2.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:6,341,414 – 6,351,983
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE63202.AR.LNCaP 214 bp overlap
ARNTL 1 dataset
ChIP U2OS GSE44236.ARNTL.U2OS 196 bp overlap
ASCL1 1 dataset
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 133 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 248 bp overlap
BRD4 3 datasets
ChIP 402-91 GSE111253.BRD4.402-91 279 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 249 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 211 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 136 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 150 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 85 bp overlap
CRY1 1 dataset
ChIP U2OS GSE44236.CRY1.U2OS 203 bp overlap
CTCF 5 datasets
ChIP GM23338 ENCFF531QOI 78 bp overlap
ChIP H9 ENCFF152GTF 75 bp overlap
ChIP HFFc6 ENCFF005CJI 192 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 71 bp overlap
ChIP endodermal cell ENCFF471YCZ 298 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 104 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 195 bp overlap
EP300 1 dataset
ChIP Ishikawa ENCFF364ZWT 417 bp overlap
ESR1 17 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 175 bp overlap
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 235 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 292 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 228 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 569 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 453 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 453 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 271 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 569 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 498 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 382 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 469 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 369 bp overlap
ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 424 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 566 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 482 bp overlap
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 183 bp overlap
ETV6 1 dataset
ChIP Reh_pCCL-ETV6-HA GSE102785.ETV6.Reh_pCCL-ETV6-HA 181 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 217 bp overlap
MITF 6 datasets
ChIP 501-mel GSE137522.MITF.501-mel 128 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 186 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 100 bp overlap
ChIP 501-mel_K243R GSE137522.MITF.501-mel_K243R 123 bp overlap
ChIP K-562 ENCSR797SWM.MITF.K-562 88 bp overlap
ChIP K562 ENCFF731XJJ 130 bp overlap
MORC2 1 dataset
ChIP HeLa_V5-HUSH-KO GSE95451.MORC2.HeLa_V5-HUSH-KO 175 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 252 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 262 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 171 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 405 bp overlap
RELA 2 datasets
ChIP 786-O GSE86092.RELA.786-O 181 bp overlap
ChIP 786-O GSE86092.RELA.786-O 234 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 264 bp overlap
TCF4 1 dataset
ChIP CAL-1 GSE76147.TCF4.CAL-1 202 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 57 bp overlap
USF1 1 dataset
ChIP H1 ENCFF090WVU 53 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 151 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 232 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 178 bp overlap