Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

39 transcription factors

BRD4 4 datasets

ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 490 bp overlap

ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 123 bp overlap

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 229 bp overlap

ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 202 bp overlap

CDX2 1 dataset

ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 287 bp overlap

CREB1 1 dataset

ChIP WA01 ENCSR000BSN.CREB1.WA01 138 bp overlap

CRX 2 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 135 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 209 bp overlap

CTCF 1 dataset

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 253 bp overlap

FOXO1-PAX3 1 dataset

ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 188 bp overlap

GATA2 1 dataset

ChIP TF1 GSE73207.GATA2.TF1 167 bp overlap

GTF3C2 1 dataset

ChIP H9 GSE94418.GTF3C2.H9 198 bp overlap

HDAC2 1 dataset

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 329 bp overlap

IFNA1 2 datasets

ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 196 bp overlap

ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 265 bp overlap

MAF 1 dataset

ChIP CD4_TH2 GSE72266.MAF.CD4_TH2 217 bp overlap

MEF2D 1 dataset

ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 205 bp overlap

MYBL2 1 dataset

ChIP A-673 GSE119971.MYBL2.A-673 490 bp overlap

MZF1 1 dataset

ChIP HEK293 ENCSR298QUH.MZF1.HEK293 240 bp overlap

NANOG 2 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 464 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 202 bp overlap

NEUROD1 2 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 295 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 274 bp overlap

NFATC1 1 dataset

ChIP GM12878 ENCSR000BQL.NFATC1.GM12878 123 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 203 bp overlap

PAF1 1 dataset

ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 435 bp overlap

PAX8 1 dataset

ChIP K-562 ENCSR274CGK.PAX8.K-562 138 bp overlap

POLR2A 1 dataset

ChIP SK-N-MC ENCFF088IVG 375 bp overlap

POU5F1 2 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 490 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 91 bp overlap

SIX2 1 dataset

ChIP HEK GSE73865.SIX2.HEK 174 bp overlap

SMAD2-3 1 dataset

ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 490 bp overlap

SMAD3 1 dataset

ChIP SUM159PT GSE130364.SMAD3.SUM159PT 490 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 84 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 395 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 300 bp overlap

SOX8 1 dataset

ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 234 bp overlap

SPI1 7 datasets

ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 156 bp overlap

ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 218 bp overlap

ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 188 bp overlap

ChIP HL-60 ENCFF645GBT 271 bp overlap

ChIP K-562 GSE70482.SPI1.K-562 245 bp overlap

ChIP K-562 ENCSR000BGW.SPI1.K-562 155 bp overlap

ChIP K562 ENCFF410ORC 205 bp overlap

SUPT5H 3 datasets

ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 337 bp overlap

ChIP HeLa GSE125534.SUPT5H.HeLa 275 bp overlap

ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 70 bp overlap

SUPT6H 1 dataset

ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 403 bp overlap

TP53 1 dataset

ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 138 bp overlap

YY1 1 dataset

ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 224 bp overlap

ZNF121 2 datasets

ChIP HEK293 GSE76494.ZNF121.HEK293 173 bp overlap

ChIP WTC11 ENCFF291API 268 bp overlap

ZNF316 2 datasets

ChIP K-562 ENCSR200JYP.ZNF316.K-562 247 bp overlap

ChIP K562 ENCFF281INV 279 bp overlap

ZNF335 1 dataset

ChIP HEK293 ENCFF784SLD 62 bp overlap

ZNF362 1 dataset

ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 374 bp overlap

ZNF770 3 datasets

ChIP HEK293 ENCFF468FCG 311 bp overlap

ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 260 bp overlap

ChIP HEK293 GSE76494.ZNF770.HEK293 203 bp overlap

Gene	Expression	Dist. to TSS	Distance	Link type
NDUFA4		9.0 kb	Proximal	Proximity
ENSG00000271185		9.3 kb	Proximal	Proximity

Genome Browser