chr7 : 25,954,339 – 25,954,635
296 bp 24 TFs 3 linked genes
This 296 bp open chromatin element is linked to ENSG00000288962, ENSG00000270933, and MIR148A and is bound by 24 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000288962 2.8 kb Proximal Proximity
ENSG00000270933 3.5 kb Proximal Proximity
MIR148A 4.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:25,949,339 – 25,959,635
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 90 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 296 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 107 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 296 bp overlap
ChIP DE DE-FOXA2-2 296 bp overlap
GABPA 1 dataset
ChIP K562 ENCFF139LXS 105 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 296 bp overlap
ChIP DE DE-GATA4-2 296 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 259 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 296 bp overlap
ChIP DE DE-GATA6-2 296 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 296 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 135 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 244 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 296 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 296 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 180 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 271 bp overlap
KDM1A 3 datasets
ChIP H1 ENCFF696SGD 124 bp overlap
ChIP SET-2_GSK GSE121424.KDM1A.SET-2_GSK 93 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 175 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCFF065NZG 254 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 171 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 249 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 171 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 152 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 183 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 296 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 296 bp overlap
ChIP hESC GSE18292.NANOG.hESC 98 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
POU5F1 1 dataset
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 296 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 86 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 85 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 246 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 228 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 291 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 104 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 242 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 210 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 140 bp overlap
TEAD1 4 datasets
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 119 bp overlap
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 156 bp overlap
ChIP WTC11 ENCFF502QUV 288 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 269 bp overlap
TEAD4 2 datasets
ChIP H1 ENCFF778PAX 131 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 206 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 296 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 219 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 142 bp overlap