chr7 : 29,128,296 – 29,129,278
982 bp 36 TFs 2 linked genes
This 982 bp open chromatin element is linked to CPVL and CHN2 and is bound by 36 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CPVL 17.6 kb Distal Multiome
CHN2 17.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:29,123,296 – 29,134,278
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP NMC24335 GSE96775.BRD4.NMC24335 270 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 547 bp overlap
E2F8 1 dataset
Motif DE_60h DE_60h-E2F8_MA0865.3 9 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 179 bp overlap
ChIP hESC GSE26097.EOMES.hESC 391 bp overlap
FOXA1 2 datasets
ChIP HepG2 ENCFF207NVJ 281 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 287 bp overlap
FOXA2 5 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 234 bp overlap
ChIP DE DE-FOXA2-1 982 bp overlap
ChIP DE DE-FOXA2-2 965 bp overlap
ChIP HepG2 ENCFF533COJ 297 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 379 bp overlap
GATA1 2 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 77 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 110 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 982 bp overlap
ChIP DE DE-GATA4-2 982 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 320 bp overlap
ChIP foregut GSE117136.GATA4.foregut 179 bp overlap
ChIP foregut GSE117136.GATA4.foregut 556 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 482 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 371 bp overlap
GATA6 12 datasets
ChIP AGS GSE51705.GATA6.AGS 132 bp overlap
ChIP DE DE-GATA6-1 982 bp overlap
ChIP DE DE-GATA6-2 982 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 282 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 982 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 384 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 199 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 531 bp overlap
ChIP foregut GSE117136.GATA6.foregut 249 bp overlap
ChIP foregut GSE117136.GATA6.foregut 579 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 431 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 276 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 156 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 261 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 51 bp overlap
NUTM1 1 dataset
ChIP NMC24335 GSE96775.NUTM1.NMC24335 443 bp overlap
ONECUT1 4 datasets
ChIP H9 ERP004206.ONECUT1.H9 139 bp overlap
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 129 bp overlap
ChIP HepG2 ENCFF243FIR 227 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 213 bp overlap
ONECUT2 1 dataset
ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 167 bp overlap
PATZ1 1 dataset
Motif DE_60h DE_60h-PATZ1_MA1961.2 11 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 207 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 301 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 508 bp overlap
SMAD2_3 3 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 195 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 485 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 982 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 250 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 187 bp overlap
SOX17 2 datasets
ChIP DE_D2 DED2-SOX17_Batch_II 284 bp overlap
ChIP DE_D2 DED2-SOX17_Batch_II 402 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 948 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 500 bp overlap
SP1 1 dataset
Motif DE_60h DE_60h-SP1_MA0079.5 9 bp overlap
SP2 1 dataset
Motif DE_60h DE_60h-SP2_MA0516.3 9 bp overlap
SP3 1 dataset
Motif DE_60h DE_60h-SP3_MA0746.3 11 bp overlap
SP5 1 dataset
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 217 bp overlap
TAL1 1 dataset
ChIP ProEs GSE59087.TAL1.ProEs 174 bp overlap
TP53 1 dataset
ChIP IMR-90_SENES_SHLUC GSE42728.TP53.IMR-90_SENES_SHLUC 128 bp overlap
ZBTB33 1 dataset
ChIP HepG2 ENCFF778UKV 337 bp overlap
ZNF121 2 datasets
ChIP HEK293 ENCFF839FUF 441 bp overlap
ChIP HEK293 ENCSR224QDY.ZNF121.HEK293 256 bp overlap
ZNF425 1 dataset
ChIP HEK293T GSE78099.ZNF425.HEK293T 136 bp overlap
ZNF532 1 dataset
ChIP NMC24335 GSE96775.ZNF532.NMC24335 410 bp overlap