chr7 : 35,263,294 – 35,263,692
398 bp 24 TFs 2 linked genes
This 398 bp open chromatin element is linked to ENSG00000289335 and TBX20 and is bound by 24 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000289335 8.6 kb Proximal Proximity
TBX20 9.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:35,258,294 – 35,268,692
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 258 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 226 bp overlap
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 145 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 392 bp overlap
EZH2 6 datasets
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 148 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 278 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 269 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 327 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 298 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 189 bp overlap
GATA2 1 dataset
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 284 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 398 bp overlap
ChIP DE DE-GATA4-2 398 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 398 bp overlap
ChIP DE DE-GATA6-2 398 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 398 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 398 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 398 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 398 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 398 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 398 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 389 bp overlap
ChIP foregut GSE117136.GATA6.foregut 398 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 226 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 322 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 61 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 106 bp overlap
KLF5 1 dataset
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 156 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 259 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 282 bp overlap
SMAD2-3 3 datasets
ChIP HGrC1_WT GSE138496.SMAD2-3.HGrC1_WT 99 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 354 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 398 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 297 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 394 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 270 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 295 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 275 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 393 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 360 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 234 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 241 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 113 bp overlap