chr7 : 47,989,729 – 47,990,281
552 bp 165 TFs 3 linked genes
This 552 bp open chromatin element is linked to SUN3, HUS1, and UPP1 and is bound by 165 transcription factors.
Linked Genes
3 genes
Distance
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SUN3 766 bp At TSS Proximity
HUS1 10.4 kb Distal Multiome
UPP1 99.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:47,984,729 – 47,995,281
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
165 transcription factors
Source
Cell type
ARID3A 1 dataset
ChIP HepG2 ENCFF341DES 414 bp overlap
ARID4A 1 dataset
ChIP HepG2 ENCFF142DIE 552 bp overlap
ARID4B 1 dataset
ChIP HepG2 ENCFF519OXJ 264 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 297 bp overlap
ATF1 1 dataset
ChIP HepG2 ENCFF239LTQ 487 bp overlap
ATOH7 2 datasets
Motif DE_12h DE_12h-ATOH7_MA1468.1 10 bp overlap
Motif ES_0h ES_0h-ATOH7_MA1468.1 10 bp overlap
BCL6 1 dataset
ChIP HepG2 ENCFF423EJH 359 bp overlap
BNC2 1 dataset
ChIP SK-N-SH ENCFF174EMC 354 bp overlap
CEBPA 1 dataset
ChIP HepG2 ENCFF175DFS 298 bp overlap
CEBPG 1 dataset
ChIP HepG2 ENCFF503XBC 301 bp overlap
CREB1 1 dataset
ChIP HepG2 ENCFF245CBB 321 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH ENCFF868MXA 223 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 284 bp overlap
Crx 2 datasets
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
Motif ES_0h ES_0h-Crx_MA0467.3 6 bp overlap
DLX6 1 dataset
ChIP HepG2 ENCFF371CVH 342 bp overlap
DMAP1 1 dataset
ChIP HepG2 ENCFF247MSU 499 bp overlap
DMRTA2 1 dataset
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
Dmbx1 2 datasets
Motif DE_12h DE_12h-Dmbx1_MA0883.2 10 bp overlap
Motif ES_0h ES_0h-Dmbx1_MA0883.2 10 bp overlap
Dmrt1 1 dataset
Motif DE_12h DE_12h-Dmrt1_MA1603.2 9 bp overlap
E2F8 2 datasets
ChIP HepG2 ENCFF117UYU 472 bp overlap
ChIP HepG2 ENCFF117UYU 476 bp overlap
ELF3 1 dataset
ChIP HepG2 ENCFF633ULY 331 bp overlap
EP300 1 dataset
ChIP HepG2 ENCFF076TMZ 334 bp overlap
ERF 1 dataset
ChIP HepG2 ENCFF647PIT 430 bp overlap
ESRRA 2 datasets
Motif DE_12h DE_12h-ESRRA_MA0592.4 9 bp overlap
Motif ES_0h ES_0h-ESRRA_MA0592.4 9 bp overlap
ESRRB 2 datasets
Motif DE_12h DE_12h-ESRRB_MA0141.4 10 bp overlap
Motif ES_0h ES_0h-ESRRB_MA0141.4 10 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 102 bp overlap
ETV5 1 dataset
ChIP HepG2 ENCFF456LSA 334 bp overlap
Esrrg 2 datasets
Motif DE_12h DE_12h-Esrrg_MA0643.2 9 bp overlap
Motif ES_0h ES_0h-Esrrg_MA0643.2 9 bp overlap
FOSL2 1 dataset
ChIP HepG2 ENCFF548CXY 343 bp overlap
FOXA1 3 datasets
ChIP HepG2 ENCFF207NVJ 95 bp overlap
ChIP HepG2 ENCFF361KNY 285 bp overlap
ChIP HepG2 ENCFF740VZW 269 bp overlap
FOXA2 5 datasets
ChIP DE DE-FOXA2-1 335 bp overlap
ChIP DE DE-FOXA2-2 235 bp overlap
ChIP HepG2 ENCFF533COJ 281 bp overlap
ChIP HepG2 ENCFF570ABM 163 bp overlap
ChIP HepG2 ENCFF894AYY 209 bp overlap
FOXA3 1 dataset
ChIP HepG2 ENCFF005KGL 162 bp overlap
FOXJ3 1 dataset
ChIP HepG2 ENCFF430OSX 455 bp overlap
FOXK1 1 dataset
ChIP HepG2 ENCFF635XWY 367 bp overlap
FOXP1 1 dataset
ChIP HepG2 ENCFF823ERM 326 bp overlap
FOXP4 1 dataset
ChIP HepG2 ENCFF462ULY 379 bp overlap
GABPA 1 dataset
ChIP HepG2 ENCFF180FFY 347 bp overlap
GATAD1 1 dataset
ChIP HepG2 ENCFF044OVE 402 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 239 bp overlap
GSC 2 datasets
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
Motif ES_0h ES_0h-GSC_MA0648.2 6 bp overlap
GSC2 2 datasets
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
Motif ES_0h ES_0h-GSC2_MA0891.2 6 bp overlap
HDAC1 1 dataset
ChIP HepG2 ENCFF304IEJ 452 bp overlap
HDAC2 1 dataset
ChIP HepG2 ENCFF990GUQ 144 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 245 bp overlap
HMG20A 1 dataset
ChIP HepG2 ENCFF599VWU 379 bp overlap
HNF1A 4 datasets
Motif DE_12h DE_12h-HNF1A_MA0046.3 13 bp overlap
ChIP HepG2 ENCFF352VYI 324 bp overlap
ChIP HepG2 ENCFF540TRC 462 bp overlap
ChIP HepG2 ENCFF540TRC 427 bp overlap
HNF1B 2 datasets
Motif DE_12h DE_12h-HNF1B_MA0153.2 13 bp overlap
ChIP HepG2 ENCFF928THX 443 bp overlap
HNF4A 1 dataset
ChIP HepG2 ENCFF146SSF 295 bp overlap
HOXA3 1 dataset
ChIP HepG2 ENCFF374TCI 435 bp overlap
IKZF5 1 dataset
ChIP HepG2 ENCFF641EBK 411 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 268 bp overlap
ISL2 1 dataset
ChIP HepG2 ENCFF742RIP 417 bp overlap
JUN::JUNB 2 datasets
Motif ES_0h ES_0h-JUNJUNB_MA1132.2 8 bp overlap
Motif ES_0h ES_0h-JUNJUNB_MA1133.2 11 bp overlap
KAT8 1 dataset
ChIP HepG2 ENCFF890JFC 414 bp overlap
KDM6A 1 dataset
ChIP HepG2 ENCFF135ECT 381 bp overlap
KLF16 1 dataset
ChIP HepG2 ENCFF969FFI 407 bp overlap
LCOR 1 dataset
ChIP HepG2 ENCFF499KCU 374 bp overlap
LIN54 1 dataset
ChIP HepG2 ENCFF662XDE 514 bp overlap
MAF 3 datasets
Motif DE_12h DE_12h-MAF_MA1520.2 13 bp overlap
Motif ES_0h ES_0h-MAF_MA1520.2 13 bp overlap
Motif ES_0h ES_0h-MAF_MA1520.2 13 bp overlap
MAF::NFE2 3 datasets
Motif DE_12h DE_12h-MAFNFE2_MA0501.2 11 bp overlap
Motif ES_0h ES_0h-MAFNFE2_MA0501.2 11 bp overlap
Motif ES_0h ES_0h-MAFNFE2_MA0501.2 11 bp overlap
MAFA 3 datasets
Motif DE_12h DE_12h-MAFA_MA1521.2 13 bp overlap
Motif ES_0h ES_0h-MAFA_MA1521.2 13 bp overlap
Motif ES_0h ES_0h-MAFA_MA1521.2 13 bp overlap
MAFG::NFE2L1 3 datasets
Motif DE_12h DE_12h-MAFGNFE2L1_MA0089.3 11 bp overlap
Motif ES_0h ES_0h-MAFGNFE2L1_MA0089.3 11 bp overlap
Motif ES_0h ES_0h-MAFGNFE2L1_MA0089.3 11 bp overlap
MAFK 2 datasets
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
Motif ES_0h ES_0h-MAFK_MA0496.4 10 bp overlap
MAX 3 datasets
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 109 bp overlap
ChIP HepG2 ENCFF479OHI 234 bp overlap
ChIP HepG2 ENCFF507HCX 314 bp overlap
MBD4 2 datasets
ChIP HepG2 ENCFF785HSD 420 bp overlap
ChIP HepG2 ENCFF785HSD 471 bp overlap
MED1 1 dataset
ChIP HepG2 ENCFF495TSS 398 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
ChIP HepG2 ENCFF157BEH 392 bp overlap
MGA 2 datasets
ChIP HepG2 ENCFF057YJE 531 bp overlap
ChIP HepG2 ENCFF057YJE 505 bp overlap
MIXL1 1 dataset
ChIP HepG2 ENCFF817YFO 216 bp overlap
MLX 1 dataset
ChIP HepG2 ENCFF652PXN 311 bp overlap
MXI1 3 datasets
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap
ChIP HepG2 ENCFF493ITN 332 bp overlap
MYC 1 dataset
ChIP HepG2 ENCFF575FXK 447 bp overlap
Mafg 2 datasets
Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap
Motif ES_0h ES_0h-Mafg_MA0659.4 12 bp overlap
NCOA2 1 dataset
ChIP HepG2 ENCFF853BJJ 382 bp overlap
NEUROG1 2 datasets
Motif DE_12h DE_12h-NEUROG1_MA0623.2 10 bp overlap
Motif ES_0h ES_0h-NEUROG1_MA0623.2 10 bp overlap
NFIL3 1 dataset
ChIP HepG2 ENCFF686VLI 253 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 151 bp overlap
NR2F1 1 dataset
ChIP HepG2 ENCFF953UJL 301 bp overlap
NR2F6 2 datasets
ChIP HepG2 ENCFF429VKC 368 bp overlap
ChIP HepG2 ENCFF514UJI 130 bp overlap
NR5A1 3 datasets
Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap
Motif ES_0h ES_0h-NR5A1_MA1540.3 12 bp overlap
ChIP HepG2 ENCFF970YZO 342 bp overlap
NR5A2 1 dataset
ChIP A549 ENCFF834RVE 394 bp overlap
Nfe2l2 3 datasets
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
Motif ES_0h ES_0h-Nfe2l2_MA0150.3 11 bp overlap
Motif ES_0h ES_0h-Nfe2l2_MA0150.3 11 bp overlap
Nr5A2 2 datasets
Motif DE_12h DE_12h-Nr5A2_MA0505.3 9 bp overlap
Motif ES_0h ES_0h-Nr5A2_MA0505.3 9 bp overlap
OSR1 1 dataset
ChIP SK-N-SH ENCFF025PMY 130 bp overlap
OTX1 2 datasets
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
Motif ES_0h ES_0h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
PATZ1 2 datasets
ChIP HepG2 ENCFF723PFC 354 bp overlap
ChIP SK-N-SH ENCFF650NCN 226 bp overlap
PAX3 2 datasets
Motif DE_12h DE_12h-PAX3_MA0780.1 10 bp overlap
Motif ES_0h ES_0h-PAX3_MA0780.1 10 bp overlap
PAXIP1 1 dataset
ChIP HepG2 ENCFF526NOJ 418 bp overlap
PHOX2A 2 datasets
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
Motif ES_0h ES_0h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 2 datasets
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
Motif ES_0h ES_0h-PHOX2B_MA0681.3 12 bp overlap
PITX1 3 datasets
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
Motif ES_0h ES_0h-PITX1_MA0682.3 6 bp overlap
ChIP HepG2 ENCFF468QTQ 201 bp overlap
PITX2 2 datasets
Motif DE_12h DE_12h-PITX2_MA1547.2 8 bp overlap
Motif ES_0h ES_0h-PITX2_MA1547.2 8 bp overlap
PITX3 2 datasets
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
Motif ES_0h ES_0h-PITX3_MA0714.2 6 bp overlap
PPARG 1 dataset
ChIP HepG2 ENCFF329FBJ 323 bp overlap
PROP1 2 datasets
Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap
Motif ES_0h ES_0h-PROP1_MA0715.1 11 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 403 bp overlap
Pax7 2 datasets
Motif DE_12h DE_12h-Pax7_MA0680.3 10 bp overlap
Motif ES_0h ES_0h-Pax7_MA0680.3 10 bp overlap
RAD21 1 dataset
ChIP HepG2 ENCFF360ZSW 217 bp overlap
RARA 3 datasets
Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap
Motif ES_0h ES_0h-RARA_MA0730.1 17 bp overlap
ChIP HepG2 ENCFF582XUA 256 bp overlap
RARA::RXRG 2 datasets
Motif DE_12h DE_12h-RARARXRG_MA1149.2 17 bp overlap
Motif ES_0h ES_0h-RARARXRG_MA1149.2 17 bp overlap
RARB 1 dataset
ChIP SK-N-SH ENCFF475WOR 187 bp overlap
RCOR2 1 dataset
ChIP HepG2 ENCFF310RFX 333 bp overlap
RHOXF1 2 datasets
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
Motif ES_0h ES_0h-RHOXF1_MA0719.2 6 bp overlap
RREB1 2 datasets
ChIP HepG2 ENCFF986CSN 334 bp overlap
ChIP HepG2 ENCFF986CSN 357 bp overlap
RXRB 1 dataset
ChIP HepG2 ENCFF539ZAY 356 bp overlap
Rarb 2 datasets
Motif DE_12h DE_12h-Rarb_MA0858.1 17 bp overlap
Motif ES_0h ES_0h-Rarb_MA0858.1 17 bp overlap
Rhox11 1 dataset
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 408 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 290 bp overlap
SIX1 1 dataset
ChIP HepG2 ENCFF587VYG 320 bp overlap
SIX2 1 dataset
ChIP HEK GSE73865.SIX2.HEK 94 bp overlap
SIX4 1 dataset
ChIP HepG2 ENCFF372NPG 255 bp overlap
SMAD4 1 dataset
ChIP HepG2 ENCFF615GTE 154 bp overlap
SNAI2 1 dataset
ChIP SK-N-SH ENCFF449PID 183 bp overlap
SOX12 1 dataset
Motif DE_12h DE_12h-SOX12_MA1561.2 10 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 282 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 216 bp overlap
SOX6 2 datasets
ChIP HepG2 ENCFF767OCK 459 bp overlap
ChIP HepG2 ENCFF767OCK 452 bp overlap
SP5 1 dataset
ChIP HepG2 ENCFF931FHV 329 bp overlap
SPI1 1 dataset
ChIP HL-60 ENCFF645GBT 266 bp overlap
STAG1 1 dataset
ChIP HepG2 ENCFF843EBZ 293 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
TBX2 1 dataset
ChIP HepG2 ENCFF811TLA 446 bp overlap
TCF7L2 1 dataset
ChIP HepG2 ENCFF510OLG 384 bp overlap
TEAD1 1 dataset
ChIP HepG2 ENCFF661PNM 348 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 355 bp overlap
TFAP4 1 dataset
ChIP HepG2 ENCFF932XOY 135 bp overlap
TFAP4::ETV1 2 datasets
Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap
Motif ES_0h ES_0h-TFAP4ETV1_MA1966.2 13 bp overlap
TFDP1 1 dataset
ChIP HepG2 ENCFF717XKC 351 bp overlap
THAP11 1 dataset
ChIP HepG2 ENCFF272SWH 392 bp overlap
THRA 1 dataset
ChIP HepG2 ENCFF025KMX 326 bp overlap
TOX 1 dataset
ChIP SK-N-SH ENCFF977TQV 173 bp overlap
TP63 1 dataset
ChIP SUIT-2 GSE115461.TP63.SUIT-2 108 bp overlap
Tfcp2l1 2 datasets
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
Motif ES_0h ES_0h-Tfcp2l1_MA0145.2 14 bp overlap
YEATS4 1 dataset
ChIP HepG2 ENCFF340OIC 478 bp overlap
ZBTB17 2 datasets
Motif DE_12h DE_12h-ZBTB17_MA2102.1 8 bp overlap
Motif ES_0h ES_0h-ZBTB17_MA2102.1 8 bp overlap
ZBTB21 1 dataset
ChIP WTC11 ENCFF677ZYY 401 bp overlap
ZBTB39 1 dataset
ChIP HepG2 ENCFF875PVQ 487 bp overlap
ZC3H10 1 dataset
ChIP SK-N-SH ENCFF465WAR 74 bp overlap
ZFX 1 dataset
ChIP HepG2 ENCFF016NZF 552 bp overlap
ZFY 1 dataset
ChIP HepG2 ENCFF106ELT 532 bp overlap
ZGPAT 1 dataset
ChIP HepG2 ENCFF055YSO 503 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 441 bp overlap
ZNF217 1 dataset
ChIP HepG2 ENCFF455XGO 445 bp overlap
ZNF219 1 dataset
ChIP HepG2 ENCFF266JIR 350 bp overlap
ZNF221 1 dataset
ChIP HepG2 ENCFF374BUN 443 bp overlap
ZNF292 1 dataset
ChIP HepG2 ENCFF975MAJ 420 bp overlap
ZNF331 2 datasets
Motif ES_0h ES_0h-ZNF331_MA1726.2 10 bp overlap
ChIP HepG2 ENCFF842SZN 355 bp overlap
ZNF354A 2 datasets
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
Motif ES_0h ES_0h-ZNF354A_MA1978.2 20 bp overlap
ZNF410 2 datasets
Motif DE_12h DE_12h-ZNF410_MA0752.2 16 bp overlap
Motif ES_0h ES_0h-ZNF410_MA0752.2 16 bp overlap
ZNF503 1 dataset
ChIP HepG2 ENCFF923HZL 358 bp overlap
ZNF549 1 dataset
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
ZNF574 1 dataset
ChIP HepG2 ENCFF206MMY 482 bp overlap
ZNF608 1 dataset
ChIP SK-N-SH ENCFF518LYG 138 bp overlap
ZNF609 2 datasets
ChIP HepG2 ENCFF900FRP 417 bp overlap
ChIP HepG2 ENCFF900FRP 411 bp overlap
ZNF644 1 dataset
ChIP HepG2 ENCFF352VGJ 333 bp overlap
ZNF680 1 dataset
Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap
ZNF710 1 dataset
ChIP HepG2 ENCFF170JWO 464 bp overlap
ZSCAN21 1 dataset
ChIP HepG2 ENCFF676MFO 471 bp overlap