chr7 : 73,740,551 – 73,741,154
603 bp 73 TFs 3 linked genes
This 603 bp open chromatin element is linked to ABHD11, BICDL3P, and ENSG00000293503 and is bound by 73 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ABHD11 1.7 kb Proximal Proximity
BICDL3P 5.1 kb Proximal Proximity
ENSG00000293503 5.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:73,735,551 – 73,746,154
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
73 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP MCF-7 GSE144036.AFF4.MCF-7 106 bp overlap
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 301 bp overlap
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 162 bp overlap
ARID1A 2 datasets
ChIP RMG-I GSE104545.ARID1A.RMG-I 603 bp overlap
ChIP RMG-I GSE120058.ARID1A.RMG-I 603 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 572 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 312 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 217 bp overlap
BRD4 14 datasets
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 275 bp overlap
ChIP CLL_patient1_4h_CpG_BET GSE109411.BRD4.CLL_patient1_4h_CpG_BET 232 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 271 bp overlap
ChIP CLL_patient2_4h_CpG GSE109411.BRD4.CLL_patient2_4h_CpG 568 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 99 bp overlap
ChIP COLO-205 GSE73319.BRD4.COLO-205 431 bp overlap
ChIP MCF-7 GSE55921.BRD4.MCF-7 585 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 576 bp overlap
ChIP MCF-7_E2 GSE55921.BRD4.MCF-7_E2 134 bp overlap
ChIP MCF-7_parental GSE123284.BRD4.MCF-7_parental 574 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 582 bp overlap
ChIP SUM185_DMSO GSE63581.BRD4.SUM185_DMSO 432 bp overlap
ChIP T-47D_DMSO GSE63581.BRD4.T-47D_DMSO 603 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 240 bp overlap
BRD9 1 dataset
ChIP G-401 GSE120234.BRD9.G-401 157 bp overlap
CCAR2 1 dataset
ChIP Hep-G2 GSE120104.CCAR2.Hep-G2 156 bp overlap
CHD1 2 datasets
ChIP MCF-7 ENCSR360JOC.CHD1.MCF-7 229 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 160 bp overlap
CREB1 2 datasets
ChIP H1 ENCFF955PMP 262 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 152 bp overlap
CTCF_s 1 dataset
ChIP HeLa-S3_biotin GSE108869.CTCF_s.HeLa-S3_biotin 158 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 57 bp overlap
ChIP BLaER1 ENCFF335XTP 260 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 269 bp overlap
ELF1 3 datasets
ChIP MCF-7 ENCFF305BNP 332 bp overlap
ChIP MCF-7 ENCSR502NRF.ELF1.MCF-7 181 bp overlap
ChIP MCF-7 ENCSR000BSS.ELF1.MCF-7 121 bp overlap
EP300 2 datasets
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 420 bp overlap
ChIP T-47D ENCSR000BLM.EP300.T-47D 185 bp overlap
ESR1 45 datasets
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 202 bp overlap
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 193 bp overlap
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 349 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 377 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 396 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 414 bp overlap
ChIP Ishikawa_Dex_E2 GSE109891.ESR1.Ishikawa_Dex_E2 201 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 489 bp overlap
ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 257 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 245 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 488 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 214 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 281 bp overlap
ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 461 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 371 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 349 bp overlap
ChIP MCF-7 ENCFF004AKH 304 bp overlap
ChIP MCF-7_4OH-Tam GSE117941.ESR1.MCF-7_4OH-Tam 282 bp overlap
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 261 bp overlap
ChIP MCF-7_D538G_DMSO GSE148277.ESR1.MCF-7_D538G_DMSO 243 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 252 bp overlap
ChIP MCF-7_G6274 GSE117941.ESR1.MCF-7_G6274 255 bp overlap
ChIP MCF-7_GDC-0927 GSE117941.ESR1.MCF-7_GDC-0927 186 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 211 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 228 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 166 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 252 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 272 bp overlap
ChIP MCF-7_estradiol-progesterone_4h GSE99626.ESR1.MCF-7_estradiol-progesterone_4h 238 bp overlap
ChIP MCF-7_estrogen GSE133941.ESR1.MCF-7_estrogen 241 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 148 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 274 bp overlap
ChIP T-47D_D538G GSE148277.ESR1.T-47D_D538G 232 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 311 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 525 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 473 bp overlap
ChIP T-47D_siCont-IL6 GSE126004.ESR1.T-47D_siCont-IL6 279 bp overlap
ChIP T-47D_siCont-Veh GSE126004.ESR1.T-47D_siCont-Veh 166 bp overlap
ChIP ZR751_E2 GSE72249.ESR1.ZR751_E2 254 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 217 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 256 bp overlap
ChIP breast_tumor_Male_19 GSE104399.ESR1.breast_tumor_Male_19 328 bp overlap
ChIP breast_tumor_Male_20 GSE104399.ESR1.breast_tumor_Male_20 174 bp overlap
ChIP breast_tumor_Male_4 GSE104399.ESR1.breast_tumor_Male_4 224 bp overlap
ChIP breast_tumor_Male_7 GSE104399.ESR1.breast_tumor_Male_7 253 bp overlap
ESR1_pS118 2 datasets
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 333 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1_pS118.MCF-7_Veh_sc 333 bp overlap
ESRRA 1 dataset
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 329 bp overlap
ETV4 1 dataset
ChIP T-47D GSE129803.ETV4.T-47D 256 bp overlap
FOS 1 dataset
ChIP MCF-7 ENCFF282FWZ 363 bp overlap
FOXA1 9 datasets
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 102 bp overlap
ChIP MCF-7_DOX-neg GSE124654.FOXA1.MCF-7_DOX-neg 216 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 249 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 266 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 167 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 179 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 182 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 300 bp overlap
ChIP primary-breast-cancer_B1_DSG GSE114737.FOXA1.primary-breast-cancer_B1_DSG 294 bp overlap
GABPA 1 dataset
ChIP MCF-7 ENCSR000BUK.GABPA.MCF-7 157 bp overlap
GATA3 1 dataset
ChIP T-47D ENCSR000BMX.GATA3.T-47D 155 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 238 bp overlap
GRHL2 1 dataset
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 541 bp overlap
GTF2F1 1 dataset
ChIP MCF-7 ENCFF576OTX 347 bp overlap
HAND2 1 dataset
Motif DE_24h DE_24h-HAND2_MA1638.2 6 bp overlap
HDAC2 1 dataset
ChIP MCF-7 ENCSR000BTP.HDAC2.MCF-7 161 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF854JLR 245 bp overlap
HSF1 20 datasets
ChIP BT-20 GSE38901.HSF1.BT-20 268 bp overlap
ChIP GM12878 ENCSR009MBP.HSF1.GM12878 150 bp overlap
ChIP HCT-116_A10_43 GSE152144.HSF1.HCT-116_A10_43 262 bp overlap
ChIP HCT-116_KOFBXW7 GSE57398.HSF1.HCT-116_KOFBXW7 389 bp overlap
ChIP HCT-116_KOFBXW7_HEAT GSE57398.HSF1.HCT-116_KOFBXW7_HEAT 241 bp overlap
ChIP MCF-7 ENCFF586GQF 317 bp overlap
ChIP MCF-7 GSE38901.HSF1.MCF-7 174 bp overlap
ChIP MCF-7 GSE45852.HSF1.MCF-7 192 bp overlap
ChIP MCF-7_estrogen-1h GSE137558.HSF1.MCF-7_estrogen-1h 416 bp overlap
ChIP MCF-7_hyperthermia-15min GSE137558.HSF1.MCF-7_hyperthermia-15min 594 bp overlap
ChIP MO91 GSE45852.HSF1.MO91 394 bp overlap
ChIP MO91_27A_20UM GSE45852.HSF1.MO91_27A_20UM 175 bp overlap
ChIP NCI-H441 GSE38901.HSF1.NCI-H441 240 bp overlap
ChIP NCI-H838 GSE38901.HSF1.NCI-H838 276 bp overlap
ChIP SK-BR-3 GSE38901.HSF1.SK-BR-3 397 bp overlap
ChIP U2OS_HEAT_20 GSE60984.HSF1.U2OS_HEAT_20 113 bp overlap
ChIP WA09_heat-shock GSE105028.HSF1.WA09_heat-shock 284 bp overlap
ChIP ZR751 GSE38901.HSF1.ZR751 253 bp overlap
ChIP breast_tumor GSE38901.HSF1.breast_tumor 291 bp overlap
ChIP colon_tumor GSE38901.HSF1.colon_tumor 171 bp overlap
HSF2 2 datasets
ChIP Hep-G2 ENCSR764ZBK.HSF2.Hep-G2 268 bp overlap
ChIP HepG2 ENCFF562EOM 361 bp overlap
JUN 2 datasets
ChIP DE_D2 S54-DE-d2-JUN-exp2 270 bp overlap
ChIP MCF-7_Tamoxifen GSE102410.JUN.MCF-7_Tamoxifen 355 bp overlap
JUND 1 dataset
ChIP MCF-7 ENCSR000BSU.JUND.MCF-7 145 bp overlap
MAX 3 datasets
ChIP Ishikawa ENCFF064TDQ 461 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 330 bp overlap
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 164 bp overlap
MBD3 1 dataset
ChIP MCF-7 GSE44737.MBD3.MCF-7 148 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 302 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 328 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 149 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 234 bp overlap
NCAPH2 2 datasets
ChIP RMG-I GSE120058.NCAPH2.RMG-I 465 bp overlap
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 596 bp overlap
NFE2L2 1 dataset
ChIP K-562 ENCSR485GKE.NFE2L2.K-562 115 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 387 bp overlap
NKX2-1 2 datasets
ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 188 bp overlap
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 150 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 189 bp overlap
PGR 2 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 197 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 192 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 234 bp overlap
POLR2A 3 datasets
ChIP H1 ENCFF566JSR 603 bp overlap
ChIP HCT116 ENCFF508RDJ 397 bp overlap
ChIP MCF-7 ENCFF164XWP 327 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 206 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 213 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 415 bp overlap
RAD21 3 datasets
ChIP HCT-116 GSE131606.RAD21.HCT-116 184 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.RAD21.HCT-116_RAD21-mAC 255 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 118 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 238 bp overlap
SFPQ 1 dataset
ChIP LTAD_EtOH GSE94577.SFPQ.LTAD_EtOH 268 bp overlap
SMAD3 3 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 357 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 260 bp overlap
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 127 bp overlap
SMARCA4 1 dataset
ChIP MCF-7 GSE140185.SMARCA4.MCF-7 523 bp overlap
SPDEF 2 datasets
ChIP MCF-7 ENCFF827PZY 298 bp overlap
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 600 bp overlap
SRF 4 datasets
ChIP H1 ENCFF036PEF 225 bp overlap
ChIP Ishikawa ENCFF992QXM 305 bp overlap
ChIP Ishikawa ENCSR000BTD.SRF.Ishikawa 201 bp overlap
ChIP MCF-7 ENCFF508RYE 397 bp overlap
STAT3 3 datasets
ChIP MCF-7 GSE152203.STAT3.MCF-7 341 bp overlap
ChIP MDA-MB-361 GSE152203.STAT3.MDA-MB-361 285 bp overlap
ChIP MDA-MB-453 GSE152203.STAT3.MDA-MB-453 226 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 157 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 385 bp overlap
SUPT6H 1 dataset
ChIP HCT-116 GSE130509.SUPT6H.HCT-116 263 bp overlap
TAF1 4 datasets
ChIP Ishikawa ENCFF271ZVL 434 bp overlap
ChIP Ishikawa ENCFF271ZVL 184 bp overlap
ChIP MCF-7 ENCSR000AHF.TAF1.MCF-7 123 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 215 bp overlap
TBP 2 datasets
ChIP hESC GSE122298.TBP.hESC 178 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 132 bp overlap
TCF12 3 datasets
ChIP Ishikawa ENCFF467DDW 384 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 412 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 246 bp overlap
TEAD1 1 dataset
ChIP HCT-116 GSE108920.TEAD1.HCT-116 346 bp overlap
TEAD4 2 datasets
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 303 bp overlap
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 273 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 196 bp overlap
TFAP2C 4 datasets
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 201 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 603 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 603 bp overlap
ChIP WA09 GSE105081.TFAP2C.WA09 141 bp overlap
TWIST1 1 dataset
Motif DE_24h DE_24h-TWIST1_MA1123.3 8 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 395 bp overlap
ZNF121 2 datasets
ChIP HEK293 ENCSR224QDY.ZNF121.HEK293 85 bp overlap
ChIP HepG2 ENCFF343YSL 92 bp overlap
ZNF184 1 dataset
ChIP HEK293 ENCSR020UPN.ZNF184.HEK293 195 bp overlap
ZNF214 1 dataset
Motif DE_24h DE_24h-ZNF214_MA1975.2 13 bp overlap
ZNF592 1 dataset
ChIP MCF-7 ENCSR701AQS.ZNF592.MCF-7 603 bp overlap
ZNF687 1 dataset
ChIP MCF-7 ENCSR899BKM.ZNF687.MCF-7 492 bp overlap
Huangfu Lab · Publications · Resources · Contact