chr7 : 87,875,330 – 87,875,523
193 bp 69 TFs 2 linked genes
This 193 bp open chromatin element is linked to DBF4 and SLC25A40 and is bound by 69 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
DBF4 691 bp At TSS Proximity
SLC25A40 781 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:87,870,330 – 87,880,523
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
69 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP K-562 ENCSR426URK.AFF1.K-562 193 bp overlap
AR 1 dataset
ChIP breast-cancer_ENOB-2854 GSE128018.AR.breast-cancer_ENOB-2854 111 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 100 bp overlap
ARID2 1 dataset
ChIP K-562 ENCSR491EBY.ARID2.K-562 125 bp overlap
ARNT 1 dataset
ChIP K-562 ENCSR613NUC.ARNT.K-562 153 bp overlap
ATF2 1 dataset
ChIP GM12878 ENCFF521LQJ 193 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 193 bp overlap
BCL6 3 datasets
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 193 bp overlap
ChIP OCI-Ly1 GSE107920.BCL6.OCI-Ly1 126 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 193 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 134 bp overlap
BRD4 2 datasets
ChIP HEK293T GSE39579.BRD4.HEK293T 156 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 193 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 107 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 193 bp overlap
CREBBP 1 dataset
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 108 bp overlap
CTCF 2 datasets
ChIP C4-2B ENCFF821XVN 175 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 50 bp overlap
CUX1 1 dataset
ChIP K562 ENCFF057AIX 181 bp overlap
E2F8 1 dataset
ChIP GM12878 ENCSR793HVL.E2F8.GM12878 142 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 193 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 193 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 193 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 193 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 193 bp overlap
ERG 2 datasets
ChIP Jurkat GSE49091.ERG.Jurkat 117 bp overlap
ChIP VCaP GSE49091.ERG.VCaP 82 bp overlap
ESRRA 3 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 101 bp overlap
ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 134 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 193 bp overlap
ETV6 2 datasets
ChIP K562 ENCFF311NMS 55 bp overlap
ChIP K562 ENCFF311NMS 193 bp overlap
FOXA1 3 datasets
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 193 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 88 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 126 bp overlap
GRHL2 1 dataset
ChIP MCF-7 GSE109820.GRHL2.MCF-7 125 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR711VWL.HDAC1.K-562 117 bp overlap
HMBOX1 2 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 125 bp overlap
ChIP K562 ENCFF317JJX 193 bp overlap
HOXB13 3 datasets
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 193 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 55 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 193 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 193 bp overlap
KDM5A 1 dataset
ChIP HepG2 ENCFF105YGO 193 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 193 bp overlap
KLF6 1 dataset
ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 152 bp overlap
KMT2A 7 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 95 bp overlap
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 171 bp overlap
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 115 bp overlap
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 193 bp overlap
ChIP MOLM-13 GSE114981.KMT2A.MOLM-13 93 bp overlap
ChIP MV4-11 GSE83671.KMT2A.MV4-11 105 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 160 bp overlap
MBD3 1 dataset
ChIP MCF-7 GSE44737.MBD3.MCF-7 68 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 193 bp overlap
MEN1 3 datasets
ChIP MCF-7 GSE85317.MEN1.MCF-7 193 bp overlap
ChIP MCF-7_E2 GSE85317.MEN1.MCF-7_E2 193 bp overlap
ChIP PC-3 GSE132827.MEN1.PC-3 92 bp overlap
MLLT1 5 datasets
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 193 bp overlap
ChIP K-562 ENCSR107GRP.MLLT1.K-562 193 bp overlap
ChIP K-562 ENCSR675LRO.MLLT1.K-562 133 bp overlap
ChIP K562 ENCFF074XRJ 193 bp overlap
ChIP K562 ENCFF871DSA 193 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 130 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 121 bp overlap
PHIP 4 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 193 bp overlap
ChIP HCT-116_MLL4-SET-KO_ab834 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab834 75 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 73 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 193 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 193 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 98 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 69 bp overlap
RAD21 1 dataset
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 72 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 193 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 96 bp overlap
SIN3A 1 dataset
ChIP MCF-7 ENCFF521RDC 193 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 164 bp overlap
SMARCA4 7 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 55 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 61 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 56 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 193 bp overlap
ChIP MCF-7 GSE140185.SMARCA4.MCF-7 193 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 97 bp overlap
ChIP TOV-21G_resistant GSE110448.SMARCA4.TOV-21G_resistant 138 bp overlap
STAT3 1 dataset
ChIP HeLa-S3 ENCFF655DGU 66 bp overlap
STAT5A 1 dataset
ChIP GM12878 ENCFF267JUM 151 bp overlap
TARDBP 2 datasets
ChIP GM12878 ENCFF866POT 193 bp overlap
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 184 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 159 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 131 bp overlap
TFAP2C 2 datasets
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 137 bp overlap
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 76 bp overlap
YY1AP1 1 dataset
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 125 bp overlap
ZBTB40 1 dataset
ChIP K562 ENCFF521DSV 138 bp overlap
ZEB1 1 dataset
ChIP MIA-PaCa-2 GSE88734.ZEB1.MIA-PaCa-2 193 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 148 bp overlap
ZNF384 1 dataset
ChIP HEK293T ENCFF019DZX 159 bp overlap
ZNF781 1 dataset
ChIP HepG2 ENCFF209OTE 193 bp overlap