chr1 : 157,162,009 – 157,162,557
548 bp 87 TFs 2 linked genes
This 548 bp open chromatin element is linked to ETV3 and ARHGEF11 and is bound by 87 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ETV3 23.8 kb Distal Multiome
ARHGEF11 116.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:157,157,009 – 157,167,557
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
87 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 120 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 406 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 98 bp overlap
CHD7 1 dataset
ChIP H1 ENCFF126NLU 534 bp overlap
CTBP1 1 dataset
ChIP MCF-7 ENCFF969VBY 299 bp overlap
Crx 1 dataset
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
E2F1 1 dataset
Motif DE_60h DE_60h-E2F1_MA0024.3 12 bp overlap
E2F2 1 dataset
Motif DE_60h DE_60h-E2F2_MA0864.3 13 bp overlap
E2F4 1 dataset
Motif DE_60h DE_60h-E2F4_MA0470.3 13 bp overlap
EP300 1 dataset
ChIP H1 ENCFF927IYK 247 bp overlap
Ebf2 1 dataset
Motif ES_0h ES_0h-Ebf2_MA1604.2 9 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 237 bp overlap
ChIP DE DE-FOXA2-2 346 bp overlap
GATA1::TAL1 3 datasets
Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 251 bp overlap
ChIP DE DE-GATA4-2 368 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
GATA5 2 datasets
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 272 bp overlap
ChIP DE DE-GATA6-2 381 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 317 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 422 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 404 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 339 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 191 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 363 bp overlap
GRHL2 6 datasets
ChIP HBE GSE46194.GRHL2.HBE 116 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 137 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 174 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 142 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 118 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 88 bp overlap
GSC 1 dataset
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
Gata3 2 datasets
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HAND2 1 dataset
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF353UJQ 389 bp overlap
ChIP H1 ENCFF353UJQ 548 bp overlap
ChIP H1 ENCFF353UJQ 367 bp overlap
HMBOX1 1 dataset
Motif DE_60h DE_60h-HMBOX1_MA0895.2 7 bp overlap
HOXB4 1 dataset
Motif ES_0h ES_0h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif ES_0h ES_0h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif ES_0h ES_0h-HOXD4_MA1507.2 6 bp overlap
Irf1 1 dataset
Motif ES_0h ES_0h-Irf1_MA0050.4 11 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 208 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 261 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 314 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 147 bp overlap
JUND 1 dataset
ChIP H1 ENCFF468JZD 170 bp overlap
Lhx3 1 dataset
Motif DE_60h DE_60h-Lhx3_MA0135.2 12 bp overlap
MAZ 1 dataset
ChIP MCF-7 ENCFF913ACQ 295 bp overlap
MITF 1 dataset
ChIP K562 ENCFF731XJJ 425 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 193 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 221 bp overlap
NHLH1 1 dataset
Motif ES_0h ES_0h-NHLH1_MA0048.3 9 bp overlap
OTX1 1 dataset
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 200 bp overlap
Olig2 1 dataset
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
PITX1 1 dataset
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
POLR2A 3 datasets
ChIP GM23338 ENCFF450WCS 294 bp overlap
ChIP H1 ENCFF566JSR 297 bp overlap
ChIP H1 ENCFF833NJP 250 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 468 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 156 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 548 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 386 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 205 bp overlap
PRDM9 1 dataset
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
Ptf1A 1 dataset
Motif ES_0h ES_0h-Ptf1A_MA1619.2 8 bp overlap
RBBP5 3 datasets
ChIP H1 ENCFF905HFL 102 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 135 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 97 bp overlap
RBPJ 1 dataset
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
REST 1 dataset
ChIP H1 ENCFF429RUE 135 bp overlap
RHOXF1 1 dataset
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
RORA 1 dataset
Motif ES_0h ES_0h-RORA_MA0072.2 11 bp overlap
SIN3A 1 dataset
ChIP H1 ENCFF042ZSL 393 bp overlap
SIX1 1 dataset
Motif ES_0h ES_0h-SIX1_MA1118.2 9 bp overlap
SMAD2 3 datasets
Motif DE_60h DE_60h-SMAD2_MA1964.2 6 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 397 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 229 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 435 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 548 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 267 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 436 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 548 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 548 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 548 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 451 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 169 bp overlap
SMARCB1 2 datasets
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 119 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 68 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 58 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 160 bp overlap
SOX2 2 datasets
ChIP hiPSC GSE56567.SOX2.hiPSC 160 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 115 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 213 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 190 bp overlap
SP4 1 dataset
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
STAT3 23 datasets
ChIP A139 GSE85579.STAT3.A139 172 bp overlap
ChIP HCC1187 GSE152203.STAT3.HCC1187 144 bp overlap
ChIP HCC1937 GSE152203.STAT3.HCC1937 119 bp overlap
ChIP HCC70 GSE152203.STAT3.HCC70 133 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 192 bp overlap
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 229 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 245 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 235 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 227 bp overlap
ChIP MCF-7_jc5842 GSE126004.STAT3.MCF-7_jc5842 195 bp overlap
ChIP MCF-7_jc5844 GSE126004.STAT3.MCF-7_jc5844 197 bp overlap
ChIP MCF-7_jc5846 GSE126004.STAT3.MCF-7_jc5846 219 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 211 bp overlap
ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 136 bp overlap
ChIP T-47D_JC4737 GSE126004.STAT3.T-47D_JC4737 122 bp overlap
ChIP T-47D_JC4741 GSE126004.STAT3.T-47D_JC4741 175 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 148 bp overlap
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 153 bp overlap
ChIP T-47D_JC4755 GSE126004.STAT3.T-47D_JC4755 148 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 166 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 185 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 175 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 172 bp overlap
Six4 1 dataset
Motif ES_0h ES_0h-Six4_MA2001.2 7 bp overlap
TAF1 1 dataset
ChIP H1 ENCFF478SZO 286 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 100 bp overlap
TEAD4 7 datasets
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 230 bp overlap
ChIP ESC S26-ESC-d0-TEAD4-exp1 345 bp overlap
ChIP H1 ENCFF778PAX 80 bp overlap
ChIP Ishikawa ENCFF772OTG 243 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 103 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 208 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 111 bp overlap
TFAP4 1 dataset
Motif ES_0h ES_0h-TFAP4_MA0691.1 10 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 317 bp overlap
TRPS1 2 datasets
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Tcf12 1 dataset
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
USF1 4 datasets
ChIP H1 ENCFF090WVU 67 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 132 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 126 bp overlap
ChIP WTC11 ENCFF699QGS 417 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 169 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 58 bp overlap
YY1AP1 3 datasets
ChIP MCF-7_E2 GSE125594.YY1AP1.MCF-7_E2 128 bp overlap
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 125 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 145 bp overlap
ZNF143 3 datasets
Motif ES_0h ES_0h-ZNF143_MA0088.2 16 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 192 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 153 bp overlap
ZNF217 1 dataset
ChIP MCF-7 ENCFF379OSU 395 bp overlap
ZNF263 1 dataset
Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap
ZNF317 1 dataset
Motif ES_0h ES_0h-ZNF317_MA1593.2 8 bp overlap
ZNF417 1 dataset
Motif DE_60h DE_60h-ZNF417_MA1727.2 7 bp overlap
ZNF675 1 dataset
Motif ES_0h ES_0h-ZNF675_MA1714.2 19 bp overlap
ZNF708 1 dataset
Motif ES_0h ES_0h-ZNF708_MA1730.2 9 bp overlap
ZNF766 1 dataset
Motif ES_0h ES_0h-ZNF766_MA2098.1 9 bp overlap
Zfp335 1 dataset
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap