chr1 : 162,443,805 – 162,444,309
504 bp 88 TFs 2 linked genes
This 504 bp open chromatin element is linked to UHMK1 and UAP1 and is bound by 88 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
UHMK1 53.8 kb Distal Multiome
UAP1 117.7 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:162,438,805 – 162,449,309
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
88 transcription factors
Source
Cell type
AR 1 dataset
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 432 bp overlap
ARNT2 1 dataset
Motif DE_72h DE_72h-ARNT2_MA1464.2 8 bp overlap
ATF4 1 dataset
Motif DE_72h DE_72h-ATF4_MA0833.3 10 bp overlap
Arnt 1 dataset
Motif DE_72h DE_72h-Arnt_MA0004.1 6 bp overlap
BARX1 1 dataset
Motif DE_72h DE_72h-BARX1_MA0875.2 6 bp overlap
BSX 1 dataset
Motif DE_72h DE_72h-BSX_MA0876.2 6 bp overlap
CEBPB 1 dataset
ChIP monocyte_INFg GSE98367.CEBPB.monocyte_INFg 157 bp overlap
CEBPG 1 dataset
Motif DE_72h DE_72h-CEBPG_MA1636.2 10 bp overlap
CLOCK 1 dataset
Motif DE_72h DE_72h-CLOCK_MA0819.3 7 bp overlap
CTCF 1 dataset
ChIP astrocyte ENCFF558APA 129 bp overlap
Crx 1 dataset
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
DLX1 1 dataset
Motif DE_72h DE_72h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_72h DE_72h-DLX6_MA0882.2 6 bp overlap
DUX4 1 dataset
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
DUXA 1 dataset
Motif DE_72h DE_72h-DUXA_MA0884.2 13 bp overlap
Dlx3 1 dataset
Motif DE_72h DE_72h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_72h DE_72h-Dlx4_MA0881.2 6 bp overlap
Dmbx1 1 dataset
Motif DE_72h DE_72h-Dmbx1_MA0883.2 10 bp overlap
Dux 1 dataset
Motif DE_72h DE_72h-Dux_MA0611.3 11 bp overlap
EN2 1 dataset
Motif DE_72h DE_72h-EN2_MA0642.3 7 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 204 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 223 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 467 bp overlap
ChIP DE DE-FOXA2-2 472 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 504 bp overlap
ChIP DE DE-GATA4-2 504 bp overlap
ChIP foregut GSE117136.GATA4.foregut 259 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 482 bp overlap
ChIP DE DE-GATA6-2 504 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 264 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 383 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 491 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 393 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 398 bp overlap
GBX1 1 dataset
Motif DE_72h DE_72h-GBX1_MA0889.2 7 bp overlap
GBX2 1 dataset
Motif DE_72h DE_72h-GBX2_MA0890.2 6 bp overlap
GLIS3 1 dataset
Motif DE_72h DE_72h-GLIS3_MA0737.1 14 bp overlap
GSC 1 dataset
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
Gfi1B 1 dataset
Motif DE_72h DE_72h-Gfi1B_MA0483.2 10 bp overlap
HES6 1 dataset
Motif DE_72h DE_72h-HES6_MA1493.1 10 bp overlap
HESX1 1 dataset
Motif DE_72h DE_72h-HESX1_MA0894.2 6 bp overlap
HOXA7 1 dataset
Motif DE_72h DE_72h-HOXA7_MA1498.3 6 bp overlap
IRF4 1 dataset
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 165 bp overlap
JUN 1 dataset
Motif DE_72h DE_72h-JUN_MA0488.2 10 bp overlap
LBX1 1 dataset
Motif DE_72h DE_72h-LBX1_MA0618.2 7 bp overlap
LBX2 1 dataset
Motif DE_72h DE_72h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_72h DE_72h-LHX2_MA0700.3 6 bp overlap
LHX9 1 dataset
Motif DE_72h DE_72h-LHX9_MA0701.3 7 bp overlap
MAX 2 datasets
Motif DE_72h DE_72h-MAX_MA0058.4 6 bp overlap
ChIP K562 ENCFF524IJO 397 bp overlap
MLXIPL 1 dataset
Motif DE_72h DE_72h-MLXIPL_MA0664.2 8 bp overlap
MNT 1 dataset
Motif DE_72h DE_72h-MNT_MA0825.2 6 bp overlap
MSX1 1 dataset
Motif DE_72h DE_72h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_72h DE_72h-MSX2_MA0708.3 6 bp overlap
MYC 2 datasets
Motif DE_72h DE_72h-MYC_MA0147.4 8 bp overlap
ChIP P493-6_scramble-shRNA GSE101853.MYC.P493-6_scramble-shRNA 174 bp overlap
MYCN 1 dataset
Motif DE_72h DE_72h-MYCN_MA0104.5 8 bp overlap
MZF1 1 dataset
Motif DE_72h DE_72h-MZF1_MA0056.3 8 bp overlap
Mecom 1 dataset
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
Mlxip 1 dataset
Motif DE_72h DE_72h-Mlxip_MA0622.2 6 bp overlap
Msx3 1 dataset
Motif DE_72h DE_72h-Msx3_MA0709.2 6 bp overlap
Nobox 1 dataset
Motif DE_72h DE_72h-Nobox_MA0125.2 6 bp overlap
Npas2 1 dataset
Motif DE_72h DE_72h-Npas2_MA0626.2 8 bp overlap
OTX1 1 dataset
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_72h DE_72h-OTX2_MA0712.3 7 bp overlap
PHOX2A 1 dataset
Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 1 dataset
Motif DE_72h DE_72h-PHOX2B_MA0681.3 12 bp overlap
PITX1 1 dataset
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
PRRX2 1 dataset
Motif DE_72h DE_72h-PRRX2_MA0075.4 7 bp overlap
RARA 1 dataset
Motif DE_72h DE_72h-RARA_MA0729.1 18 bp overlap
RAX 1 dataset
Motif DE_72h DE_72h-RAX_MA0718.2 6 bp overlap
RHOXF1 1 dataset
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
RORA 1 dataset
Motif DE_72h DE_72h-RORA_MA0072.2 11 bp overlap
SCRT1 1 dataset
Motif DE_72h DE_72h-SCRT1_MA0743.3 10 bp overlap
SIX2 1 dataset
Motif DE_72h DE_72h-SIX2_MA1119.2 11 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 403 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 409 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 379 bp overlap
SOX10 1 dataset
Motif DE_48h DE_48h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 405 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 411 bp overlap
SP5 1 dataset
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
SPI1 3 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 166 bp overlap
ChIP GM12891 ENCFF563IUT 241 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 163 bp overlap
Sox11 1 dataset
Motif DE_48h DE_48h-Sox11_MA0869.3 8 bp overlap
Stat2 1 dataset
Motif DE_72h DE_72h-Stat2_MA1623.2 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 275 bp overlap
USF2 1 dataset
ChIP K562 ENCFF306QPU 53 bp overlap
ZNF316 2 datasets
ChIP K-562 ENCSR200JYP.ZNF316.K-562 175 bp overlap
ChIP K562 ENCFF281INV 187 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCFF799ATK 194 bp overlap
ZNF449 1 dataset
Motif DE_48h DE_48h-ZNF449_MA1656.2 10 bp overlap
ZNF512 3 datasets
ChIP K-562 ENCSR591CCL.ZNF512.K-562 177 bp overlap
ChIP K562 ENCFF601EMZ 302 bp overlap
ChIP K562 ENCFF601EMZ 79 bp overlap
ZNF740 1 dataset
Motif DE_72h DE_72h-ZNF740_MA0753.3 10 bp overlap
ZNF766 1 dataset
Motif DE_72h DE_72h-ZNF766_MA2098.1 9 bp overlap
ZSCAN4 2 datasets
ChIP HEK293 ENCFF381BKT 185 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 271 bp overlap