chr8 : 29,432,484 – 29,433,492
1,008 bp 83 TFs 2 linked genes
This 1.0 kb open chromatin element is linked to DUSP4 and KIF13B and is bound by 83 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
DUSP4 82.1 kb Distal Multiome
KIF13B 169.7 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:29,427,484 – 29,438,492
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
83 transcription factors
Source
Cell type
CREBBP 1 dataset
ChIP retina_Hu33 GSE137311.CREBBP.retina_Hu33 482 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 355 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 450 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 399 bp overlap
CTCF 4 datasets
ChIP astrocyte ENCFF558APA 104 bp overlap
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 375 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 294 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 442 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 251 bp overlap
Crx 1 dataset
Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap
Dmbx1 1 dataset
Motif DE_36h DE_36h-Dmbx1_MA0883.2 10 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 575 bp overlap
ChIP hESC GSE26097.EOMES.hESC 217 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 250 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 508 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 789 bp overlap
ChIP DE DE-FOXA2-2 688 bp overlap
FOXC1 2 datasets
Motif DE_36h DE_36h-FOXC1_MA0032.2 11 bp overlap
Motif DE_48h DE_48h-FOXC1_MA0032.2 11 bp overlap
FOXC2 2 datasets
Motif DE_36h DE_36h-FOXC2_MA0846.2 11 bp overlap
Motif DE_48h DE_48h-FOXC2_MA0846.2 11 bp overlap
FOXN3 2 datasets
Motif DE_36h DE_36h-FOXN3_MA1489.1 8 bp overlap
Motif DE_48h DE_48h-FOXN3_MA1489.1 8 bp overlap
GATA1::TAL1 4 datasets
Motif DE_36h DE_36h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_36h DE_36h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
GATA4 11 datasets
ChIP DE DE-GATA4-1 1008 bp overlap
ChIP DE DE-GATA4-2 1008 bp overlap
ChIP G296S GSE85628.GATA4.G296S 231 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 231 bp overlap
ChIP cardiomyocyte GSE85628.GATA4.cardiomyocyte 319 bp overlap
ChIP cardiomyocyte_1 GSE85628.GATA4.cardiomyocyte_1 334 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 363 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 477 bp overlap
ChIP foregut GSE117136.GATA4.foregut 518 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 553 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 622 bp overlap
GATA5 3 datasets
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 17 datasets
ChIP DE DE-GATA6-1 1008 bp overlap
ChIP DE DE-GATA6-2 1008 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 672 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 974 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 406 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 1008 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 1008 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 684 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 1008 bp overlap
ChIP foregut GSE117136.GATA6.foregut 584 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 297 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 394 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 411 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 470 bp overlap
GSC 1 dataset
Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap
Gata3 3 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HNF4A 3 datasets
Motif DE_36h DE_36h-HNF4A_MA0114.5 9 bp overlap
Motif DE_48h DE_48h-HNF4A_MA0114.5 9 bp overlap
Motif DE_60h DE_60h-HNF4A_MA0114.5 9 bp overlap
HNF4G 3 datasets
Motif DE_36h DE_36h-HNF4G_MA0484.3 9 bp overlap
Motif DE_48h DE_48h-HNF4G_MA0484.3 9 bp overlap
Motif DE_60h DE_60h-HNF4G_MA0484.3 9 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 505 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 324 bp overlap
MAFF 2 datasets
Motif DE_36h DE_36h-MAFF_MA0495.4 11 bp overlap
Motif DE_48h DE_48h-MAFF_MA0495.4 11 bp overlap
MEF2D 3 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 354 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 387 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 284 bp overlap
MEIS1 4 datasets
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
MYB 2 datasets
Motif DE_36h DE_36h-MYB_MA0100.4 6 bp overlap
Motif DE_48h DE_48h-MYB_MA0100.4 6 bp overlap
MYF6 3 datasets
Motif DE_36h DE_36h-MYF6_MA0667.1 10 bp overlap
Motif DE_48h DE_48h-MYF6_MA0667.1 10 bp overlap
Motif DE_60h DE_60h-MYF6_MA0667.1 10 bp overlap
Mafb 2 datasets
Motif DE_36h DE_36h-Mafb_MA0117.3 11 bp overlap
Motif DE_48h DE_48h-Mafb_MA0117.3 11 bp overlap
Msgn1 2 datasets
Motif DE_36h DE_36h-Msgn1_MA1524.3 10 bp overlap
Motif DE_48h DE_48h-Msgn1_MA1524.3 10 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 220 bp overlap
NKX2-2 2 datasets
Motif DE_36h DE_36h-NKX2-2_MA1645.2 8 bp overlap
Motif DE_48h DE_48h-NKX2-2_MA1645.2 8 bp overlap
NKX2-3 2 datasets
Motif DE_36h DE_36h-NKX2-3_MA0672.2 8 bp overlap
Motif DE_48h DE_48h-NKX2-3_MA0672.2 8 bp overlap
NKX2-4 2 datasets
Motif DE_36h DE_36h-NKX2-4_MA2003.2 8 bp overlap
Motif DE_48h DE_48h-NKX2-4_MA2003.2 8 bp overlap
NKX2-5 4 datasets
Motif DE_36h DE_36h-NKX2-5_MA0063.3 7 bp overlap
Motif DE_48h DE_48h-NKX2-5_MA0063.3 7 bp overlap
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 447 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 329 bp overlap
NKX2-8 2 datasets
Motif DE_36h DE_36h-NKX2-8_MA0673.2 8 bp overlap
Motif DE_48h DE_48h-NKX2-8_MA0673.2 8 bp overlap
NR4A1 4 datasets
Motif DE_36h DE_36h-NR4A1_MA1112.3 8 bp overlap
Motif DE_36h DE_36h-NR4A1_MA1112.3 8 bp overlap
Motif DE_48h DE_48h-NR4A1_MA1112.3 8 bp overlap
Motif DE_48h DE_48h-NR4A1_MA1112.3 8 bp overlap
NR4A2 4 datasets
Motif DE_36h DE_36h-NR4A2_MA0160.3 8 bp overlap
Motif DE_36h DE_36h-NR4A2_MA0160.3 8 bp overlap
Motif DE_48h DE_48h-NR4A2_MA0160.3 8 bp overlap
Motif DE_48h DE_48h-NR4A2_MA0160.3 8 bp overlap
NRL 3 datasets
Motif DE_36h DE_36h-NRL_MA0842.3 12 bp overlap
Motif DE_48h DE_48h-NRL_MA0842.3 12 bp overlap
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 370 bp overlap
Nkx2-1 2 datasets
Motif DE_36h DE_36h-Nkx2-1_MA1994.2 7 bp overlap
Motif DE_48h DE_48h-Nkx2-1_MA1994.2 7 bp overlap
Nr1h3::Rxra 2 datasets
Motif DE_36h DE_36h-Nr1h3Rxra_MA0494.2 16 bp overlap
Motif DE_48h DE_48h-Nr1h3Rxra_MA0494.2 16 bp overlap
Nr2e3 1 dataset
Motif DE_36h DE_36h-Nr2e3_MA0164.2 6 bp overlap
ONECUT3 3 datasets
Motif DE_36h DE_36h-ONECUT3_MA0757.2 12 bp overlap
Motif DE_48h DE_48h-ONECUT3_MA0757.2 12 bp overlap
Motif DE_60h DE_60h-ONECUT3_MA0757.2 12 bp overlap
OSR1 1 dataset
Motif DE_36h DE_36h-OSR1_MA1542.2 8 bp overlap
OSR2 1 dataset
Motif DE_36h DE_36h-OSR2_MA1646.2 8 bp overlap
OTX1 1 dataset
Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 455 bp overlap
PAX1 1 dataset
Motif DE_36h DE_36h-PAX1_MA0779.2 16 bp overlap
PAX2 1 dataset
Motif DE_36h DE_36h-PAX2_MA0067.3 16 bp overlap
PAX8 1 dataset
Motif DE_36h DE_36h-PAX8_MA2094.1 16 bp overlap
PAX9 1 dataset
Motif DE_36h DE_36h-PAX9_MA0781.2 16 bp overlap
PITX1 1 dataset
Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_36h DE_36h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap
POU1F1 3 datasets
Motif DE_36h DE_36h-POU1F1_MA0784.3 14 bp overlap
Motif DE_48h DE_48h-POU1F1_MA0784.3 14 bp overlap
Motif DE_60h DE_60h-POU1F1_MA0784.3 14 bp overlap
POU2F2 3 datasets
Motif DE_36h DE_36h-POU2F2_MA0507.3 13 bp overlap
Motif DE_48h DE_48h-POU2F2_MA0507.3 13 bp overlap
Motif DE_60h DE_60h-POU2F2_MA0507.3 13 bp overlap
POU3F2 3 datasets
Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap
Motif DE_48h DE_48h-POU3F2_MA0787.1 12 bp overlap
Motif DE_60h DE_60h-POU3F2_MA0787.1 12 bp overlap
POU3F3 3 datasets
Motif DE_36h DE_36h-POU3F3_MA0788.1 13 bp overlap
Motif DE_48h DE_48h-POU3F3_MA0788.1 13 bp overlap
Motif DE_60h DE_60h-POU3F3_MA0788.1 13 bp overlap
Pparg::Rxra 2 datasets
Motif DE_36h DE_36h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_48h DE_48h-PpargRxra_MA0065.3 13 bp overlap
RHOXF1 1 dataset
Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 371 bp overlap
Runx1 2 datasets
Motif DE_36h DE_36h-Runx1_MA0002.3 9 bp overlap
Motif DE_48h DE_48h-Runx1_MA0002.3 9 bp overlap
SATB1 3 datasets
Motif DE_36h DE_36h-SATB1_MA1963.2 7 bp overlap
Motif DE_48h DE_48h-SATB1_MA1963.2 7 bp overlap
Motif DE_60h DE_60h-SATB1_MA1963.2 7 bp overlap
SCRT1 3 datasets
Motif DE_36h DE_36h-SCRT1_MA0743.3 10 bp overlap
Motif DE_48h DE_48h-SCRT1_MA0743.3 10 bp overlap
Motif DE_60h DE_60h-SCRT1_MA0743.3 10 bp overlap
SCRT2 3 datasets
Motif DE_36h DE_36h-SCRT2_MA0744.3 10 bp overlap
Motif DE_48h DE_48h-SCRT2_MA0744.3 10 bp overlap
Motif DE_60h DE_60h-SCRT2_MA0744.3 10 bp overlap
SMAD2 2 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 139 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 178 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 1008 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 897 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 519 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 974 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 1008 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 222 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 416 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 950 bp overlap
SPI1 1 dataset
ChIP EM-3 GSE128834.SPI1.EM-3 190 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 458 bp overlap
TBX5 1 dataset
ChIP hiPSC GSE81585.TBX5.hiPSC 290 bp overlap
TRPS1 3 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
ZBTB24 3 datasets
Motif DE_36h DE_36h-ZBTB24_MA2330.1 10 bp overlap
Motif DE_48h DE_48h-ZBTB24_MA2330.1 10 bp overlap
Motif DE_60h DE_60h-ZBTB24_MA2330.1 10 bp overlap
ZIC1 1 dataset
Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap
ZNF317 2 datasets
Motif DE_36h DE_36h-ZNF317_MA1593.2 8 bp overlap
Motif DE_48h DE_48h-ZNF317_MA1593.2 8 bp overlap
ZNF354C 3 datasets
Motif DE_36h DE_36h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_48h DE_48h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_60h DE_60h-ZNF354C_MA0130.1 6 bp overlap
ZNF512 1 dataset
ChIP WTC11 ENCFF086TTM 121 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 271 bp overlap
ZNF582 1 dataset
Motif DE_36h DE_36h-ZNF582_MA1983.2 19 bp overlap
ZNF766 1 dataset
Motif DE_48h DE_48h-ZNF766_MA2098.1 9 bp overlap
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