chr8 : 49,917,491 – 49,917,903

412 bp 44 TFs 2 linked genes

This 412 bp open chromatin element is linked to ENSG00000289095 and SNTG1 and is bound by 44 transcription factors.

Linked Genes

2 genes

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000289095		7.3 kb	Proximal	Proximity
SNTG1		7.7 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

44 transcription factors

ARID1A 1 dataset

ChIP HAP1 GSE108387.ARID1A.HAP1 384 bp overlap

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 280 bp overlap

ATRX 1 dataset

ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 112 bp overlap

BCOR 1 dataset

ChIP WA01 GSE104690.BCOR.WA01 214 bp overlap

BRD4 1 dataset

ChIP HAP1 GSE108387.BRD4.HAP1 307 bp overlap

ELF1 1 dataset

Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 101 bp overlap

HIC2 1 dataset

Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap

JUN 1 dataset

ChIP HUES-8 GSE109524.JUN.HUES-8 326 bp overlap

LIN54 1 dataset

Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap

MYC 1 dataset

ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 156 bp overlap

NANOG 8 datasets

ChIP GM23338 ENCFF065NZG 254 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 229 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 412 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 365 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 412 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 407 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 276 bp overlap

ChIP hESC GSE18292.NANOG.hESC 96 bp overlap

NR1I2 1 dataset

Motif DE_12h DE_12h-NR1I2_MA1533.2 15 bp overlap

PCGF1 1 dataset

ChIP WA01 GSE104690.PCGF1.WA01 190 bp overlap

POU2F1 1 dataset

Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 1 dataset

ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 92 bp overlap

POU2F3 2 datasets

Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap

POU3F1 1 dataset

Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap

POU3F4 1 dataset

Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap

POU5F1 9 datasets

Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap

ChIP GM23338 ENCFF333SNB 285 bp overlap

ChIP H1 ENCFF698ZAP 205 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 412 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 223 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 166 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 412 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 412 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 212 bp overlap

POU5F1B 1 dataset

Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

RAD21 1 dataset

ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 265 bp overlap

REST 1 dataset

ChIP LNCaP GSE119385.REST.LNCaP 179 bp overlap

SALL3 1 dataset

ChIP hiPSC GSE104863.SALL3.hiPSC 353 bp overlap

SMAD3 1 dataset

ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 327 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 279 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 341 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 199 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 240 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 260 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 412 bp overlap

SP5 1 dataset

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

TFAP2A 2 datasets

Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap

Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap

TFAP2B 1 dataset

Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap

TFAP2C 4 datasets

Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap

Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 412 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 411 bp overlap

TRIM28 1 dataset

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 137 bp overlap

ZNF214 1 dataset

Motif DE_12h DE_12h-ZNF214_MA1975.2 13 bp overlap

ZNF274 1 dataset

Motif DE_12h DE_12h-ZNF274_MA1592.2 12 bp overlap

ZNF317 1 dataset

Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 209 bp overlap

ZNF530 1 dataset

Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap

ZNF667 1 dataset

Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap

Zfp335 1 dataset

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap