chr8 : 54,464,038 – 54,464,280
242 bp 26 TFs 2 linked genes
This 242 bp open chromatin element is linked to ENSG00000274310 and SOX17 and is bound by 26 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000274310 2.9 kb Proximal Proximity
SOX17 6.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:54,459,038 – 54,469,280
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 162 bp overlap
ASH2L 1 dataset
ChIP VCaP GSE60841.ASH2L.VCaP 160 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 230 bp overlap
CBX8 1 dataset
ChIP H1 ENCFF095JHA 112 bp overlap
ESR1 3 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 66 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 66 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 147 bp overlap
EZH2 12 datasets
ChIP GM23338 ENCFF613YON 80 bp overlap
ChIP H1 ENCFF232NZA 242 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 242 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 162 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 242 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 242 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 242 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 242 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 201 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 242 bp overlap
ChIP neural progenitor cell ENCFF018MKA 242 bp overlap
ChIP neural progenitor cell ENCFF472NFV 242 bp overlap
GABPA 1 dataset
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 180 bp overlap
GATA6 2 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 216 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 70 bp overlap
GRHL2 1 dataset
ChIP OVCA429 GSE71018.GRHL2.OVCA429 134 bp overlap
JARID2 7 datasets
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 242 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 173 bp overlap
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 242 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 217 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 242 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 193 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 242 bp overlap
KDM3A 1 dataset
ChIP 22Rv1_shKDM3A GSE109748.KDM3A.22Rv1_shKDM3A 92 bp overlap
KMT2D 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4-T910M 190 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 133 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 242 bp overlap
PCGF2 1 dataset
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 70 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 241 bp overlap
RING1 1 dataset
ChIP SYO-1_shCt GSE139053.RING1.SYO-1_shCt 242 bp overlap
RNF2 1 dataset
ChIP H1 ENCFF239FFS 242 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 155 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 242 bp overlap
SMARCA4 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 132 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 93 bp overlap
STAT3 3 datasets
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 197 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 196 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 242 bp overlap
SUZ12 3 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 242 bp overlap
ChIP H1 ENCFF881NFR 242 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 150 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 220 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 141 bp overlap